G00012RZ

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Sequence

GlycoCT

RES 1b:b-dglc-HEX-1:5 2s:n-acetyl 3b:b-dglc-HEX-1:5 4s:n-acetyl 5b:b-dman-HEX-1:5 6b:a-dman-HEX-1:5 7b:a-dman-HEX-1:5 8b:a-lgal-HEX-1:5|6:d LIN 1:1d(2+1)2n 2:1o(4+1)3d 3:3d(2+1)4n 4:3o(4+1)5d 5:5o(3+1)6d 6:5o(6+1)7d 7:1o(6+1)8d UND UND1:100.0:100.0 ParentIDs:1|3|5|6|7|8 SubtreeLinkageID1:x(-1+1)x RES 9b:b-dglc-HEX-1:5 10s:n-acetyl 11b:a-lgal-HEX-1:5|6:d 12b:b-dgal-HEX-1:5 13b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 14s:n-acetyl LIN 8:9d(2+1)10n 9:9o(3+1)11d 10:9o(4+1)12d 11:12o(-1+2)13d 12:13d(5+1)14n UND2:100.0:100.0 ParentIDs:1|3|5|6|7|8 SubtreeLinkageID1:x(-1+1)x RES 15b:b-dglc-HEX-1:5 16s:n-acetyl 17b:a-lgal-HEX-1:5|6:d 18b:b-dgal-HEX-1:5 LIN 13:15d(2+1)16n 14:15o(3+1)17d 15:15o(4+1)18d UND3:100.0:100.0 ParentIDs:1|3|5|6|7|8 SubtreeLinkageID1:x(-1+1)x RES 19b:b-dglc-HEX-1:5 20s:n-acetyl 21b:b-dgal-HEX-1:5 LIN 16:19d(2+1)20n 17:19o(4+1)21d

GlyTouCan
GlycoWorkBench

redEnd--?b?D-b-D-Glcp,p((--2NAc)--4b1D-b-D-Glcp,p(--2NAc)--4b1D-b-D-Manp,p(--3a1D-a-D-Manp,p)--6a1D-a-D-Manp,p)--6a1L-a-L-Fucp,p}((--?b?D-b-D-Glcp,p((--2NAc)--3a1L-a-L-Fucp,p)--4b1D-b-D-Galp,p--?a2D-a-D-Neup,p--5NAc)--?b?D-b-D-Glcp,p((--2NAc)--3a1L-a-L-Fucp,p)--4b1D-b-D-Galp,p)--?b?D-b-D-Glcp,p(--2NAc)--4b1D-b-D-Galp,p$MONO,perMe,Na,0,redEnd

EdwardsLab
WURCS

WURCS=2.0/6,15,14/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5][a1221m-1a_1-5][a2112h-1b_1-5][Aad21122h-2a_2-6_5*NCC/3=O]/1-1-2-3-3-4-1-4-5-6-1-4-5-1-5/a4-b1_a6-f1_b4-c1_c3-d1_c6-e1_g3-h1_g4-i1_k3-l1_k4-m1_n4-o1_i?-j2_g1-a?|b?|c?|d?|e?|f?}_k1-a?|b?|c?|d?|e?|f?}_n1-a?|b?|c?|d?|e?|f?}

GlyTouCan

Species

Human Evidence Composition closure of G11696PX via G74930DK
Composition closure of G42504VW via G74930DK
Composition closure of G65760UO via G74930DK
EdwardsLab

Molecular Weight

PermethylatedMW 3379.71341519 EdwardsLab
UnderivitizedMW 2734.99351197 EdwardsLab
UnderivitizedMW 2734.9935107 GlyTouCan

Classification

GlycanSubtype N-linked complex GlycoMotif:GGM.001004
GlycanSubtype N-linked bisected GlycoMotif:GGM.001023
GlycanSubtype N-linked core-fucosylated GlycoMotif:GGM.001024
GlycanSubtype N-linked arm-fucosylated GlycoMotif:GGM.001025
GlycanType N-linked GlycoMotif:GGM.001004

Monosaccharide Counts

FucCount 3 EdwardsLab
GalCount 3 EdwardsLab
GlcNAcCount 5 EdwardsLab
HexCount 6 EdwardsLab
HexNAcCount 5 EdwardsLab
ManCount 3 EdwardsLab
MonosaccharideCount 15 EdwardsLab
NeuAcCount 1 EdwardsLab
SiaCount 1 EdwardsLab
dHexCount 3 EdwardsLab
MonosaccharideCount 15 GlyTouCan

Cross Reference

GlyGen G00012RZ EdwardsLab
GNOme G00012RZ GNOme
GlyCosmos G00012RZ GlyCosmos
GlyTouCan G00012RZ GlyTouCan
GlycomeDB 36696 GlyTouCan

Glycan Motif

ClassMotif GGM.001001, GGM.001004, GGM.001023, GGM.001024, GGM.001025, GGM.001027 GlycoMotif
Motif GGM.000001, GGM.000018, GGM.000022, GGM.000034 GlycoMotif
StrictClassMotif GGM.001001, GGM.001024, GGM.001027 GlycoMotif
StrictMotif GGM.000001, GGM.000018 GlycoMotif

Subsumption

Ancestor G01087FD, G04784US, G15037AY, G20312EM, G28989NC, G74930DK, G80075MS GNOme
BaseComposition G28989NC GNOme
Composition G74930DK GNOme
Level Saccharide GNOme
MissingScore 382 GNOme
SubsumedBy G15037AY GNOme
Topology G01087FD GNOme

Glycan Structure

Composition false EdwardsLab
FullyDetermined false EdwardsLab
HasMonosaccharide Fuc, Gal, GlcNAc, Hex, HexNAc, Man, NeuAc, Sia, dHex EdwardsLab
HasRepeat false EdwardsLab
ReducingEnd GlcNAc, HexNAc EdwardsLab
UndeterminedTopology true EdwardsLab