G00028MO

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Sequence

GlycoCT

RES 1b:x-dglc-HEX-x:x 2s:n-acetyl 3b:b-dglc-HEX-1:5 4s:n-acetyl 5b:b-dman-HEX-1:5 6b:a-dman-HEX-1:5 7b:a-dman-HEX-1:5 8b:a-dman-HEX-1:5 9b:a-dman-HEX-1:5 LIN 1:1d(2+1)2n 2:1o(4+1)3d 3:3d(2+1)4n 4:3o(4+1)5d 5:5o(3+1)6d 6:5o(6+1)7d 7:7o(3+1)8d 8:7o(6+1)9d

GlyTouCan
GlycoWorkBench

redEnd--?D-?-D-Glc(--2NAc)--4b1D-b-D-Glcp,p(--2NAc)--4b1D-b-D-Manp,p(--3a1D-a-D-Manp,p)--6a1D-a-D-Manp,p(--3a1D-a-D-Manp,p)--6a1D-a-D-Manp,p$MONO,perMe,Na,0,redEnd

EdwardsLab
IUPAC

alpha-D-Manp-(1->3)[alpha-D-Manp-(1->3)[alpha-D-Manp-(1->6)]-alpha-D-Manp-(1->6)]-beta-D-Manp-(1->4)-beta-D-GlcpNAc-(1->4)-?-D-GlcNAc

EdwardsLab
IUPAC

alpha-D-Manp-(1->3)[alpha-D-Manp-(1->3)[alpha-D-Manp-(1->6)]-alpha-D-Manp-(1->6)]-beta-D-Manp-(1->4)-beta-D-GlcpNAc-(1->4)-D-GlcNAc

GlyCosmos
WURCS

WURCS=2.0/4,7,6/[u2122h_2*NCC/3=O][a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5]/1-2-3-4-4-4-4/a4-b1_b4-c1_c3-d1_c6-e1_e3-f1_e6-g1

GlyTouCan

Taxonomy

Taxonomy 3885, 3988, 4530, 7458 GlyTouCan:G00028MO

Species

FruitFly Evidence Subsumption of G03652TR
Subsumption of G55220VL
EdwardsLab
Human Evidence Subsumption of G03652TR
Subsumption of G55220VL
EdwardsLab
Mouse Evidence Subsumption of G03652TR
Subsumption of G55220VL
EdwardsLab
Rat Evidence Subsumption of G03652TR
Subsumption of G55220VL
EdwardsLab
SARS Evidence Composition closure of G32104JU via G89929IA EdwardsLab

Molecular Weight

PermethylatedMW 1556.79337902 EdwardsLab
UnderivitizedMW 1234.43342741 EdwardsLab
UnderivitizedMW 1234.4334268 GlyTouCan

Classification

GlycanSubtype N-linked high mannose GlycoMotif:GGM.001002
GlycanType N-linked GlycoMotif:GGM.001002

Monosaccharide Counts

GlcNAcCount 2 EdwardsLab
HexCount 5 EdwardsLab
HexNAcCount 2 EdwardsLab
ManCount 5 EdwardsLab
MonosaccharideCount 7 EdwardsLab
MonosaccharideCount 7 GlyTouCan

Cross Reference

GlyGen G00028MO EdwardsLab
GNOme G00028MO GNOme
GlyCosmos G00028MO GlyCosmos
Carbbank(CCSB) 878, 2771, 4322, 4324, 4414, 4894, 5230, 5935, 5936, 5939, 5940, 5942, 5943, 5945, 5948, 5949, 5950, 5951, 5955, 5956, 5958, 5959, 5960, 5961, 5963, 5965, 5966, 5970, 5971, 5972, 5973, 5975, 5977, 5978, 5980, 5982, 5988, 5989, 5993, 5994, 5996, 5997, 5998, 5999, 6541, 6569, 6679, 10552, 10998, 17380, 18085, 18257, 18308, 18519, 18764, 19165, 19848, 20588, 20974, 21122, 21159, 21382, 21655, 21686, 22591, 22700, 23254, 23799, 23965, 24199, 25145, 25215, 26661, 27360, 28836, 29737, 31029, 33015, 33051, 33077, 33080, 33502, 33836, 33837, 33865, 36418, 37954, 37998, 39264, 40510, 44671, 46277, 48164, 49526 GlyTouCan
GLYCOSCIENCES.de 708, 16000, 16454 GlyTouCan
GlyTouCan G00028MO GlyTouCan
GlycomeDB 565 GlyTouCan

Glycan Motif

ClassMotif GGM.001001, GGM.001002, GGM.001027 GlycoMotif
StrictClassMotif GGM.001001, GGM.001002 GlycoMotif

Subsumption

Ancestor G02815KT, G16127HW, G44147IO, G53758RJ, G88492IK, G89929IA GNOme
BaseComposition G02815KT GNOme
Composition G89929IA GNOme
Descendant G03652TR, G55220VL, G58214IQ GNOme
FullyDetermined G55220VL, G58214IQ GNOme
Level Saccharide GNOme
MissingScore 199 GNOme
SubsumedBy G53758RJ, G88492IK GNOme
Subsumes G03652TR GNOme
Topology G16127HW GNOme

Glycan Structure

Composition false EdwardsLab
FullyDetermined true EdwardsLab
HasMonosaccharide GlcNAc, Hex, HexNAc, Man EdwardsLab
HasRepeat false EdwardsLab
ReducingEnd GlcNAc, HexNAc EdwardsLab
UndeterminedTopology false EdwardsLab