G00030MO

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Sequence

GlycoCT

RES 1b:x-dglc-HEX-x:x 2s:n-acetyl 3b:b-dglc-HEX-1:5 4s:n-acetyl 5b:b-dman-HEX-1:5 6b:a-dman-HEX-1:5 7b:b-dglc-HEX-1:5 8s:n-acetyl 9b:a-dman-HEX-1:5 10b:b-dglc-HEX-1:5 11s:n-acetyl LIN 1:1d(2+1)2n 2:1o(4+1)3d 3:3d(2+1)4n 4:3o(4+1)5d 5:5o(3+1)6d 6:6o(2|4+1)7d 7:7d(2+1)8n 8:5o(6+1)9d 9:9o(2|4+1)10d 10:10d(2+1)11n

GlyTouCan
GlycoWorkBench

redEnd--?D-?-D-Glc(--2NAc)--4b1D-b-D-Glcp,p(--2NAc)--4b1D-b-D-Manp,p(--3a1D-a-D-Manp,p--2/4b1D-b-D-Glcp,p--2NAc)--6a1D-a-D-Manp,p--2/4b1D-b-D-Glcp,p--2NAc$MONO,perMe,Na,0,redEnd

EdwardsLab
IUPAC

beta-D-GlcpNAc-(1->2/4)-alpha-D-Manp-(1->3)[beta-D-GlcpNAc-(1->2/4)-alpha-D-Manp-(1->6)]-beta-D-Manp-(1->4)-beta-D-GlcpNAc-(1->4)-?-D-GlcNAc

EdwardsLab
IUPAC

beta-D-GlcpNAc-(1->2/4)-alpha-D-Manp-(1->3)[beta-D-GlcpNAc-(1->2/4)-alpha-D-Manp-(1->6)]-beta-D-Manp-(1->4)-beta-D-GlcpNAc-(1->4)-D-GlcNAc

GlyCosmos
WURCS

WURCS=2.0/4,7,6/[u2122h_2*NCC/3=O][a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5]/1-2-3-4-2-4-2/a4-b1_b4-c1_c3-d1_c6-f1_e1-d2|d4_g1-f2|f4

GlyTouCan

Species

FruitFly Evidence Subsumption of G39213VZ EdwardsLab
Human Evidence Subsumption of G39213VZ
Subsumption of G42679AH
Subsumption of G56175ED
Subsumption of G84678BK
Subsumption of G88876JQ
EdwardsLab
Mouse Evidence Subsumption of G39213VZ
Subsumption of G84678BK
Subsumption of G88876JQ
EdwardsLab
Rat Evidence Subsumption of G39213VZ
Subsumption of G88876JQ
EdwardsLab
SARS Evidence Composition closure of G39943KJ via G15843XU EdwardsLab

Molecular Weight

PermethylatedMW 1638.84647723 EdwardsLab
UnderivitizedMW 1316.48652562 EdwardsLab
UnderivitizedMW 1316.486525 GlyTouCan

Classification

GlycanSubtype N-linked complex GlycoMotif:GGM.001004
GlycanType N-linked GlycoMotif:GGM.001004

Monosaccharide Counts

GlcNAcCount 4 EdwardsLab
HexCount 3 EdwardsLab
HexNAcCount 4 EdwardsLab
ManCount 3 EdwardsLab
MonosaccharideCount 7 EdwardsLab
MonosaccharideCount 7 GlyTouCan

Cross Reference

GlyGen G00030MO EdwardsLab
GNOme G00030MO GNOme
GlyCosmos G00030MO GlyCosmos
GlyTouCan G00030MO GlyTouCan

Glycan Motif

ClassMotif GGM.001001, GGM.001004, GGM.001027 GlycoMotif
StrictClassMotif GGM.001001, GGM.001004 GlycoMotif

Subsumption

Ancestor G10996NE, G15843XU, G26402SO, G35029YA, G80012SO GNOme
BaseComposition G35029YA GNOme
Composition G15843XU GNOme
Descendant G01364WM, G39213VZ, G41125AS, G42679AH, G56175ED, G56977BH, G84678BK, G88876JQ GNOme
FullyDetermined G39213VZ, G42679AH, G56977BH GNOme
Level Saccharide GNOme
MissingScore 250 GNOme
SubsumedBy G10996NE GNOme
Subsumes G01364WM, G41125AS GNOme
Topology G26402SO GNOme

Glycan Structure

Composition false EdwardsLab
FullyDetermined false EdwardsLab
HasMonosaccharide GlcNAc, Hex, HexNAc, Man EdwardsLab
HasRepeat false EdwardsLab
ReducingEnd GlcNAc, HexNAc EdwardsLab
UndeterminedTopology false EdwardsLab