G00031MO

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Names

SemanticName T antigen GlycoMotif

Sequence

GLYCAM-IUPAC

DGalpb1-3DGalpNAca1-OH

EdwardsLab
GlycoCT

RES 1b:a-dgal-HEX-1:5 2s:n-acetyl 3b:b-dgal-HEX-1:5 LIN 1:1d(2+1)2n 2:1o(3+1)3d

GlyTouCan
GlycoWorkBench

redEnd--?a?D-a-D-Galp,p(--2NAc)--3b1D-b-D-Galp,p$MONO,perMe,Na,0,redEnd

EdwardsLab
IUPAC

beta-D-Galp-(1->3)-alpha-D-GalpNAc-(1->

EdwardsLab
IUPAC

beta-D-Galp-(1->3)-alpha-D-GalpNAc-(1->

GlyCosmos
WURCS

WURCS=2.0/2,2,1/[a2112h-1a_1-5_2*NCC/3=O][a2112h-1b_1-5]/1-2/a3-b1

GlyTouCan

Taxonomy

Taxonomy 7227, 9606, 10090, 10116, 2697049 GlyConnectStructure:1947
Taxonomy 9606 GlyConnectStructure:9262
Taxonomy 622, 7227, 8048, 9544, 9606, 9615, 9825, 9913, 9986, 10029, 10090, 10114, 10116, 48550, 185739 GlyTouCan:G00031MO
Taxonomy 9606 UniCarbKB:4

Species

FruitFly Evidence GlyConnectStructure:1947 TaxID 7227
GlyTouCan:G00031MO TaxID 7227
EdwardsLab
Human Evidence GlyConnectStructure:1947 TaxID 9606
GlyConnectStructure:9262 TaxID 9606
GlyTouCan:G00031MO TaxID 9606
No N-linked Xyl and no NeuGc, Alt
UniCarbKB:4 TaxID 9606
EdwardsLab
Mouse Evidence GlyConnectStructure:1947 TaxID 10090
GlyTouCan:G00031MO TaxID 10090
No N-linked Xyl and no Alt
EdwardsLab
Rat Evidence GlyConnectStructure:1947 TaxID 10116
GlyTouCan:G00031MO TaxID 10114
GlyTouCan:G00031MO TaxID 10116
No N-linked Xyl and no Alt
EdwardsLab
SARS Evidence GlyConnectStructure:1947 TaxID 2697049 EdwardsLab

Molecular Weight

PermethylatedMW 495.267961365 EdwardsLab
UnderivitizedMW 383.142760805 EdwardsLab
UnderivitizedMW 383.14276063 GlyTouCan

Classification

GlycanSubtype O-linked core 1 GlycoMotif:GGM.001005
GlycanType O-linked GlycoMotif:GGM.001005

Monosaccharide Counts

GalCount 1 EdwardsLab
GalNAcCount 1 EdwardsLab
HexCount 1 EdwardsLab
HexNAcCount 1 EdwardsLab
MonosaccharideCount 2 EdwardsLab
MonosaccharideCount 2 GlyTouCan

Cross Reference

GlyGen G00031MO EdwardsLab
GNOme G00031MO GNOme
GlyConnectStructure 9262 GlyConnect
GlyCosmos G00031MO GlyCosmos
BCSDB 26644, 149993 GlyTouCan
CFG carbOlink_20077_D000, carbOlink_20078_D000, carbOlink_20079_D000, carbSynthe_0068_D000, carbSynthe_0434_D000, carbSynthe_0627_D000 GlyTouCan
Carbbank(CCSB) 98, 99, 100, 2225, 2226, 2227, 2228, 2229, 2230, 2231, 2232, 2234, 2235, 2236, 2237, 2238, 2239, 2240, 2241, 2242, 2243, 3235, 3236, 3239, 3240, 3245, 3255, 3406, 3795, 3803, 3842, 3846, 3903, 4685, 5035, 5038, 5203, 5232, 5434, 5887, 14321, 20223, 20981, 25363, 25729, 25730, 28182, 29012, 29046, 29175, 29393, 29521, 29709, 30501, 30734, 30735, 30848, 30849, 30850, 30917, 32646, 33002, 33022, 33211, 33469, 33576, 33832, 33848, 33851, 33878, 33952, 34693, 34766, 34823, 34829, 34830, 34986, 34995, 35029, 35050, 35069, 35107, 35108, 35805, 35833, 35991, 36264, 36818, 36826, 36863, 37676, 37768, 37770, 38102, 38263, 38587, 38640, 38672, 38687, 40630, 40825, 40957, 41263, 41866, 42208, 42209, 42740, 42797, 42875, 43908, 43915, 43921, 43923, 43951, 44029, 44376, 44505, 44775, 45972, 45973, 45974, 45975, 45976, 45977, 45978, 45979, 45980, 45981, 46056, 46438, 46466, 46562, 47015, 47100, 47186, 47327, 47600, 47770, 48244, 48247, 48891, 49121, 49283, 49507, 50477, 50865 GlyTouCan
ChEBI CHEBI:60241, CHEBI:61820, CHEBI:62464, CHEBI:62465 GlyTouCan
GLYCOSCIENCES.de 571, 578, 584, 611, 672, 2332, 2865, 3236, 5194, 5220, 5221, 5984, 7131, 7133, 7215, 7507, 7508, 7885, 9376, 9829, 9830, 9831, 9832, 9833, 9834, 9835, 9836, 9837, 9838, 12910, 14141, 14142, 14143, 14144, 14297, 14395, 15921, 17216, 17629, 17651, 17720, 17721, 19449, 19450, 19451, 19454, 19768, 19769, 21799, 27185 GlyTouCan
GlyConnectStructure 1947 GlyTouCan
GlyTouCan G00031MO GlyTouCan
GlycoEpitope EP0020 GlyTouCan
GlycomeDB 475 GlyTouCan
KEGG G00024, G12692 GlyTouCan
PDB 1jot, 1lti, 1m26, 1ugx, 1y2v, 1y2w, 1y2x, 2dva, 3afk, 3aya, 3nk3, 3qdt, 3qdx, 3qdy, 3qum, 4akc GlyTouCan
PubChem CID5288347, SID252294787 GlyTouCan
GlycO GOG922 GlycomeDB
UniCarbKB 4 UniCarbKB

Publications

Publication 1370965, 1516058, 2335739, 2404571, 2450649, 2736629, 2908846, 3731131, 3880667, 7496150, 7516636, 7539400, 7545084, 8551046, 8609376, 8625037, 8985092, 9212232, 9334809, 9359491, 9857245, 10365852, 10506931, 11193738, 11326683, 11389097, 11396208, 11406562, 11447138, 11501845, 11528254, 12761161, 12946359, 12995288, 14736333, 14741734, 15179519, 15221966, 15466199, 15505370, 15623485, 15843572, 15862866, 15864746, 16033536, 16177266, 16203776, 16384952, 16525726, 16547942, 16563047, 16615117, 16770733, 16776550, 16804430, 16824489, 16965854, 16990264, 17057347, 17090649, 17100645, 17457671, 17537433, 17607374, 17652409, 17674202, 17694322, 17708590, 18282768, 18301385, 18662810, 18824562, 19021580, 19162326, 19496993, 21551457 GlyTouCan
Publication 468798, 1374031, 1820200, 2033371, 2793860, 2943741, 2971663, 3342257, 3514617, 3935432, 4091823, 6190803, 6619126, 6725284, 7430095, 8323299, 8344280, 8384526, 8631363, 9449027, 9852066, 10441114, 10861392, 22678432 UniCarbKB:4

Glycan Motif

ClassMotif GGM.001005, GGM.001006 GlycoMotif
Motif GGM.000009 GlycoMotif
StrictClassMotif GGM.001005, GGM.001006 GlycoMotif
StrictMotif GGM.000009 GlycoMotif

Subsumption

Ancestor G00032MO, G00682IE, G01416HI, G06105ER, G06859AF, G13342FP, G14660IB, G20015ZD, G22015OG, G23052ZQ, G23202WP, G29931IJ, G30710NE, G36124QZ, G43326BY, G43417UB, G48849EN, G49632WD, G50849VH, G54499HR, G64346BI, G65288NK, G67200RM, G67221IP, G68199DI, G76950LE, G78436BB, G79150MP, G89089XB, G91785UC GNOme
BaseComposition G43417UB GNOme
Composition G23052ZQ GNOme
Level Saccharide GNOme
MissingScore 0 GNOme
SubsumedBy G00682IE, G23202WP, G50849VH, G54499HR, G78436BB, G89089XB GNOme
Topology G67200RM GNOme

Glycan Structure

Composition false EdwardsLab
FullyDetermined true EdwardsLab
HasMonosaccharide Gal, GalNAc, Hex, HexNAc EdwardsLab
HasRepeat false EdwardsLab
ReducingEnd GalNAc, HexNAc EdwardsLab
UndeterminedTopology false EdwardsLab