G00035MO
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Sequence
| GLYCAM-IUPAC | DGlcpNAcb1-3DGalpNAca1-OH |
EdwardsLab |
|---|---|---|
| GlycoCT | RES 1b:a-dgal-HEX-1:5 2s:n-acetyl 3b:b-dglc-HEX-1:5 4s:n-acetyl LIN 1:1d(2+1)2n 2:1o(3+1)3d 3:3d(2+1)4n |
GlyTouCan |
| GlycoWorkBench | redEnd--?a?D-a-D-Galp,p(--2NAc)--3b1D-b-D-Glcp,p--2NAc$MONO,perMe,Na,0,redEnd |
EdwardsLab |
| IUPAC | beta-D-GlcpNAc-(1->3)-alpha-D-GalpNAc-(1-> |
EdwardsLab |
| IUPAC | beta-D-GlcpNAc-(1->3)-alpha-D-GalpNAc-(1-> |
GlyCosmos |
| WURCS | WURCS=2.0/2,2,1/[a2112h-1a_1-5_2*NCC/3=O][a2122h-1b_1-5_2*NCC/3=O]/1-2/a3-b1 |
GlyTouCan |
Taxonomy
| Taxonomy | 9606, 10116 | GlyConnectStructure:2294 |
|---|---|---|
| Taxonomy | 9606 | GlyTouCan:G00035MO |
Species
| Human Evidence | GlyConnectStructure:2294 TaxID 9606 GlyTouCan:G00035MO TaxID 9606 No N-linked Xyl and no NeuGc, Alt |
EdwardsLab |
|---|---|---|
| Mouse Evidence | Composition closure of G91311MD via G94131HY | EdwardsLab |
| Rat Evidence | GlyConnectStructure:2294 TaxID 10116 No N-linked Xyl and no Alt |
EdwardsLab |
Molecular Weight
| PermethylatedMW | 536.29451047 | EdwardsLab |
|---|---|---|
| UnderivitizedMW | 424.16930991 | EdwardsLab |
| UnderivitizedMW | 424.16930973 | GlyTouCan |
Classification
| GlycanSubtype | O-linked core 3 | GlycoMotif:GGM.001009 |
|---|---|---|
| GlycanType | O-linked | GlycoMotif:GGM.001009 |
Monosaccharide Counts
| GalNAcCount | 1 | EdwardsLab |
|---|---|---|
| GlcNAcCount | 1 | EdwardsLab |
| HexNAcCount | 2 | EdwardsLab |
| MonosaccharideCount | 2 | EdwardsLab |
| MonosaccharideCount | 2 | GlyTouCan |
Cross Reference
| GlyGen | G00035MO | EdwardsLab |
|---|---|---|
| GNOme | G00035MO | GNOme |
| GlyCosmos | G00035MO | GlyCosmos |
| CFG | carbSynthe_0851_D000 | GlyTouCan |
| Carbbank(CCSB) | 3347, 30844, 33470, 38651, 42738, 43960, 47102 | GlyTouCan |
| ChEBI | CHEBI:71344, CHEBI:87260, CHEBI:87261 | GlyTouCan |
| GLYCOSCIENCES.de | 608, 7171, 14094 | GlyTouCan |
| GlyConnectStructure | 2294 | GlyTouCan |
| GlyTouCan | G00035MO | GlyTouCan |
| GlycomeDB | 483 | GlyTouCan |
| KEGG | G00028 | GlyTouCan |
| PDB | 2w1u | GlyTouCan |
| PubChem | CID25061208, SID252285840 | GlyTouCan |
| GlycO | GOG923 | GlycomeDB |
Glycan Motif
| ClassMotif | GGM.001009, GGM.001010 | GlycoMotif |
|---|---|---|
| StrictClassMotif | GGM.001009, GGM.001010 | GlycoMotif |
Subsumption
| Ancestor | G00036MO, G00219VH, G27391WQ, G29636OK, G47318KU, G60564JX, G64842RE, G67375UD, G68646SF, G71838YU, G85714GY, G86947FH, G94131HY | GNOme |
|---|---|---|
| BaseComposition | G27391WQ | GNOme |
| Composition | G94131HY | GNOme |
| Level | Saccharide | GNOme |
| MissingScore | 0 | GNOme |
| SubsumedBy | G00219VH, G64842RE, G85714GY | GNOme |
| Topology | G86947FH | GNOme |
Glycan Structure
| Composition | false | EdwardsLab |
|---|---|---|
| FullyDetermined | true | EdwardsLab |
| HasMonosaccharide | GalNAc, GlcNAc, HexNAc | EdwardsLab |
| HasRepeat | false | EdwardsLab |
| ReducingEnd | GalNAc, HexNAc | EdwardsLab |
| UndeterminedTopology | false | EdwardsLab |