G00035MO
Sequence
GLYCAM-IUPAC | DGlcpNAcb1-3DGalpNAca1-OH |
EdwardsLab |
---|---|---|
GlycoCT | RES 1b:a-dgal-HEX-1:5 2s:n-acetyl 3b:b-dglc-HEX-1:5 4s:n-acetyl LIN 1:1d(2+1)2n 2:1o(3+1)3d 3:3d(2+1)4n |
GlyTouCan |
GlycoCT-XML | <?xml version='1.0' encoding='UTF-8'?> <sugar version="1.0"> <residues> <monosaccharide anomer="a" id="1" name="a-dgal-HEX-1:5" ringEnd="5" ringStart="1" superclass="hex" type="b"> <basetype id="1" type="dgal" /> </monosaccharide> <substituent id="2" name="n-acetyl" type="s" /> <monosaccharide anomer="b" id="3" name="b-dglc-HEX-1:5" ringEnd="5" ringStart="1" superclass="hex" type="b"> <basetype id="1" type="dglc" /> </monosaccharide> <substituent id="4" name="n-acetyl" type="s" /> </residues> <linkages> <connection child="2" id="1" parent="1"> <linkage childType="n" id="1" parentType="d"> <parent pos="2" /> <child pos="1" /> </linkage> </connection> <connection child="3" id="2" parent="1"> <linkage childType="d" id="2" parentType="o"> <parent pos="3" /> <child pos="1" /> </linkage> </connection> <connection child="4" id="3" parent="3"> <linkage childType="n" id="3" parentType="d"> <parent pos="2" /> <child pos="1" /> </linkage> </connection> </linkages> </sugar> |
EdwardsLab |
GlycoWorkBench | freeEnd--1a1D-GalNAc,p--3b1D-GlcNAc,p$MONO,Und,0,0,freeEnd |
EdwardsLab |
IUPAC | beta-D-GlcpNAc-(1->3)-alpha-D-GalpNAc-(1-> |
EdwardsLab |
IUPAC | beta-D-GlcpNAc-(1->3)-alpha-D-GalpNAc-(1-> |
GlyCosmos |
WURCS | WURCS=2.0/2,2,1/[a2112h-1a_1-5_2*NCC/3=O][a2122h-1b_1-5_2*NCC/3=O]/1-2/a3-b1 |
GlyTouCan |
Taxonomy
Taxonomy | 9606, 10116 | GlyConnectStructure:2294 |
---|---|---|
Taxonomy | 9606 | GlyCosmos:G00035MO |
Species
Human Evidence | GlyConnectStructure:2294 TaxID 9606 GlyCosmos:G00035MO TaxID 9606 No N-linked Xyl and no NeuGc, Alt |
EdwardsLab |
---|---|---|
Mouse Evidence | Composition closure of G47318KU via G94131HY Composition closure of G91311MD via G94131HY |
EdwardsLab |
Rat Evidence | GlyConnectStructure:2294 TaxID 10116 No N-linked Xyl and no Alt |
EdwardsLab |
Molecular Weight
PermethylatedMW | 536.29451047 | EdwardsLab |
---|---|---|
UnderivitizedMW | 424.16930991 | EdwardsLab |
UnderivitizedMW | 424.16930973 | GlyTouCan |
Molecular Formula
NativeMolecularFormula | C16H26N2O10 | EdwardsLab |
---|---|---|
PermethylatedMolecularFormula | C22H38N2O10 | EdwardsLab |
Classification
GlycanSubtype | O-linked core 3 | GlycoMotif:GGM.001009 |
---|---|---|
GlycanType | O-linked | GlycoMotif:GGM.001009 |
Monosaccharide Counts
GalNAcCount | 1 | EdwardsLab |
---|---|---|
GlcNAcCount | 1 | EdwardsLab |
HexNAcCount | 2 | EdwardsLab |
MonosaccharideCount | 2 | EdwardsLab |
MonosaccharideCount | 2 | GlyTouCan |
Cross Reference
GlyGen | G00035MO | EdwardsLab |
---|---|---|
GNOme | G00035MO | GNOme |
GlyCosmos | G00035MO | GlyCosmos |
CFG | carbSynthe_0851_D000 | GlyTouCan |
Carbbank(CCSB) | 3347, 30844, 33470, 38651, 42738, 43960, 47102 | GlyTouCan |
ChEBI | CHEBI:71344, CHEBI:87260, CHEBI:87261 | GlyTouCan |
GLYCOSCIENCES.de | 608, 7171, 14094 | GlyTouCan |
GlyConnectStructure | 2294 | GlyTouCan |
GlyTouCan | G00035MO | GlyTouCan |
GlycomeDB | 483 | GlyTouCan |
KEGG | G00028 | GlyTouCan |
PDB | 2w1u | GlyTouCan |
PubChem | CID25061208, SID252285840 | GlyTouCan |
GlycO | GOG923 | GlycomeDB |
Glycan Motif
ClassMotif | GGM.001009, GGM.001010 | GlycoMotif |
---|---|---|
StrictClassMotif | GGM.001009, GGM.001010 | GlycoMotif |
Subsumption
Ancestor | G00036MO, G00219VH, G27317MD, G27391WQ, G29636OK, G47318KU, G60564JX, G63734TZ, G64842RE, G67375UD, G68646SF, G71838YU, G73862MD, G79056JA, G85714GY, G86947FH, G94131HY | GNOme |
---|---|---|
BaseComposition | G27391WQ | GNOme |
Composition | G94131HY | GNOme |
Level | Saccharide | GNOme |
MissingScore | 0 | GNOme |
SubsumedBy | G00219VH, G64842RE, G85714GY | GNOme |
Topology | G86947FH | GNOme |
Glycan Structure
Composition | false | EdwardsLab |
---|---|---|
FullyDetermined | true | EdwardsLab |
HasMonosaccharide | GalNAc, GlcNAc, HexNAc | EdwardsLab |
HasRepeat | false | EdwardsLab |
ReducingEnd | GalNAc, HexNAc | EdwardsLab |
UndeterminedTopology | false | EdwardsLab |