G00037MO

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Sequence

GLYCAM-IUPAC

DGlcpNAcb1-3[DGlcpNAcb1-6]DGalpNAca1-OH

EdwardsLab
GlycoCT

RES 1b:a-dgal-HEX-1:5 2s:n-acetyl 3b:b-dglc-HEX-1:5 4s:n-acetyl 5b:b-dglc-HEX-1:5 6s:n-acetyl LIN 1:1d(2+1)2n 2:1o(3+1)3d 3:3d(2+1)4n 4:1o(6+1)5d 5:5d(2+1)6n

GlyTouCan
GlycoWorkBench

redEnd--?a?D-a-D-Galp,p((--2NAc)--3b1D-b-D-Glcp,p--2NAc)--6b1D-b-D-Glcp,p--2NAc$MONO,perMe,Na,0,redEnd

EdwardsLab
IUPAC

beta-D-GlcpNAc-(1->3)[beta-D-GlcpNAc-(1->6)]-alpha-D-GalpNAc-(1->

EdwardsLab
IUPAC

beta-D-GlcpNAc-(1->3)[beta-D-GlcpNAc-(1->6)]-alpha-D-GalpNAc-(1->

GlyCosmos
WURCS

WURCS=2.0/2,3,2/[a2112h-1a_1-5_2*NCC/3=O][a2122h-1b_1-5_2*NCC/3=O]/1-2-2/a3-b1_a6-c1

GlyTouCan

Taxonomy

Taxonomy 9606 GlyTouCan:G00037MO

Species

Human Evidence GlyTouCan:G00037MO TaxID 9606
No N-linked Xyl and no NeuGc, Alt
EdwardsLab
Rat Evidence Composition closure of G18892PE via G20174EZ
Composition closure of G51984GX via G20174EZ
EdwardsLab

Molecular Weight

PermethylatedMW 781.420833285 EdwardsLab
UnderivitizedMW 627.248682515 EdwardsLab
UnderivitizedMW 627.24868225 GlyTouCan

Classification

GlycanSubtype O-linked core 4 GlycoMotif:GGM.001011
GlycanType O-linked GlycoMotif:GGM.001011

Monosaccharide Counts

GalNAcCount 1 EdwardsLab
GlcNAcCount 2 EdwardsLab
HexNAcCount 3 EdwardsLab
MonosaccharideCount 3 EdwardsLab
MonosaccharideCount 3 GlyTouCan

Cross Reference

GlyGen G00037MO EdwardsLab
GNOme G00037MO GNOme
GlyCosmos G00037MO GlyCosmos
CFG carbSynthe_0079_D000, carbSynthe_0690_D000 GlyTouCan
Carbbank(CCSB) 3464, 30845, 30863, 33471, 33472, 33575, 38266, 38652, 42744, 46430, 47154 GlyTouCan
ChEBI CHEBI:71341 GlyTouCan
GLYCOSCIENCES.de 4187, 7181, 12918, 25718 GlyTouCan
GlyConnectStructure 925 GlyTouCan
GlyTouCan G00037MO GlyTouCan
GlycomeDB 3125 GlyTouCan
KEGG G00029 GlyTouCan
PubChem CID25229562, SID252279040 GlyTouCan
GlycO GOG1239 GlycomeDB

Glycan Motif

ClassMotif GGM.001009, GGM.001010, GGM.001011, GGM.001012, GGM.001015, GGM.001016 GlycoMotif
StrictClassMotif GGM.001009, GGM.001010, GGM.001011, GGM.001012, GGM.001015, GGM.001016 GlycoMotif

Subsumption

Ancestor G00038MO, G18892PE, G20174EZ, G22745SA, G27119CB, G28134WJ, G35689CT, G40740AD, G51984GX, G58314JG, G60735SE, G83009HN GNOme
BaseComposition G40740AD GNOme
Composition G20174EZ GNOme
Level Saccharide GNOme
MissingScore 0 GNOme
SubsumedBy G18892PE, G51984GX GNOme
Topology G35689CT GNOme

Glycan Structure

Composition false EdwardsLab
FullyDetermined true EdwardsLab
HasMonosaccharide GalNAc, GlcNAc, HexNAc EdwardsLab
HasRepeat false EdwardsLab
ReducingEnd GalNAc, HexNAc EdwardsLab
UndeterminedTopology false EdwardsLab