G00039MO

From GlycanData
Jump to navigation Jump to search

Sequence

GLYCAM-IUPAC

DGalpNAca1-3DGalpNAca1-OH

EdwardsLab
GlycoCT

RES 1b:a-dgal-HEX-1:5 2s:n-acetyl 3b:a-dgal-HEX-1:5 4s:n-acetyl LIN 1:1d(2+1)2n 2:1o(3+1)3d 3:3d(2+1)4n

GlyTouCan
GlycoWorkBench

redEnd--?a?D-a-D-Galp,p(--2NAc)--3a1D-a-D-Galp,p--2NAc$MONO,perMe,Na,0,redEnd

EdwardsLab
IUPAC

alpha-D-GalpNAc-(1->3)-alpha-D-GalpNAc-(1->

EdwardsLab
IUPAC

alpha-D-GalpNAc-(1->3)-alpha-D-GalpNAc-(1->

GlyCosmos
WURCS

WURCS=2.0/1,2,1/[a2112h-1a_1-5_2*NCC/3=O]/1-1/a3-b1

GlyTouCan

Taxonomy

Taxonomy 9606 GlyConnectStructure:500
Taxonomy 9606 GlyTouCan:G00039MO

Species

Human Evidence GlyConnectStructure:500 TaxID 9606
GlyTouCan:G00039MO TaxID 9606
No N-linked Xyl and no NeuGc, Alt
EdwardsLab
Mouse Evidence Composition closure of G45388GV via G58852GK EdwardsLab
Rat Evidence Composition closure of G97834OQ via G58852GK EdwardsLab

Molecular Weight

PermethylatedMW 536.29451047 EdwardsLab
UnderivitizedMW 424.16930991 EdwardsLab
UnderivitizedMW 424.16930973 GlyTouCan

Classification

GlycanSubtype O-linked core 5 GlycoMotif:GGM.001013
GlycanType O-linked GlycoMotif:GGM.001013

Monosaccharide Counts

GalNAcCount 2 EdwardsLab
HexNAcCount 2 EdwardsLab
MonosaccharideCount 2 EdwardsLab
MonosaccharideCount 2 GlyTouCan

Cross Reference

GlyGen G00039MO EdwardsLab
GNOme G00039MO GNOme
GlyCosmos G00039MO GlyCosmos
BCSDB 20406, 25664 GlyTouCan
CFG carbSynthe_0072_D000 GlyTouCan
Carbbank(CCSB) 43965 GlyTouCan
ChEBI CHEBI:63230, CHEBI:73987, CHEBI:74036 GlyTouCan
GLYCOSCIENCES.de 609 GlyTouCan
GlyConnectStructure 500 GlyTouCan
GlyTouCan G00039MO GlyTouCan
GlycomeDB 484 GlyTouCan
KEGG G00030 GlyTouCan
PubChem CID91853465, SID252285892 GlyTouCan
GlycO GOG924 GlycomeDB

Publications

Publication 16630548, 19882123 GlyTouCan

Glycan Motif

ClassMotif GGM.001013, GGM.001014 GlycoMotif
StrictClassMotif GGM.001013, GGM.001014 GlycoMotif

Subsumption

Ancestor G00040MO, G23854HB, G27391WQ, G43482PE, G45388GV, G58852GK, G67375UD, G71838YU, G96636JK GNOme
BaseComposition G27391WQ GNOme
Composition G58852GK GNOme
Level Saccharide GNOme
MissingScore 0 GNOme
SubsumedBy G45388GV GNOme
Topology G23854HB GNOme

Glycan Structure

Composition false EdwardsLab
FullyDetermined true EdwardsLab
HasMonosaccharide GalNAc, HexNAc EdwardsLab
HasRepeat false EdwardsLab
ReducingEnd GalNAc, HexNAc EdwardsLab
UndeterminedTopology false EdwardsLab