G00039MO
Sequence
| GLYCAM-IUPAC | DGalpNAca1-3DGalpNAca1-OH |
EdwardsLab |
|---|---|---|
| GlycoCT | RES 1b:a-dgal-HEX-1:5 2s:n-acetyl 3b:a-dgal-HEX-1:5 4s:n-acetyl LIN 1:1d(2+1)2n 2:1o(3+1)3d 3:3d(2+1)4n |
GlyTouCan |
| GlycoCT-XML | <?xml version='1.0' encoding='UTF-8'?> <sugar version="1.0"> <residues> <monosaccharide anomer="a" id="1" name="a-dgal-HEX-1:5" ringEnd="5" ringStart="1" superclass="hex" type="b"> <basetype id="1" type="dgal" /> </monosaccharide> <substituent id="2" name="n-acetyl" type="s" /> <monosaccharide anomer="a" id="3" name="a-dgal-HEX-1:5" ringEnd="5" ringStart="1" superclass="hex" type="b"> <basetype id="1" type="dgal" /> </monosaccharide> <substituent id="4" name="n-acetyl" type="s" /> </residues> <linkages> <connection child="2" id="1" parent="1"> <linkage childType="n" id="1" parentType="d"> <parent pos="2" /> <child pos="1" /> </linkage> </connection> <connection child="3" id="2" parent="1"> <linkage childType="d" id="2" parentType="o"> <parent pos="3" /> <child pos="1" /> </linkage> </connection> <connection child="4" id="3" parent="3"> <linkage childType="n" id="3" parentType="d"> <parent pos="2" /> <child pos="1" /> </linkage> </connection> </linkages> </sugar> |
EdwardsLab |
| GlycoWorkBench | freeEnd--1a1D-GalNAc,p--3a1D-GalNAc,p$MONO,Und,0,0,freeEnd |
EdwardsLab |
| IUPAC | alpha-D-GalpNAc-(1->3)-alpha-D-GalpNAc-(1-> |
EdwardsLab |
| IUPAC | alpha-D-GalpNAc-(1->3)-alpha-D-GalpNAc-(1-> |
GlyCosmos |
| WURCS | WURCS=2.0/1,2,1/[a2112h-1a_1-5_2*NCC/3=O]/1-1/a3-b1 |
GlyTouCan |
Taxonomy
| Taxonomy | 9606 | GlyConnectStructure:500 |
|---|---|---|
| Taxonomy | 562, 9606 | GlyCosmos:G00039MO |
Species
| Human Evidence | GlyConnectStructure:500 TaxID 9606 GlyCosmos:G00039MO TaxID 9606 No N-linked Xyl and no NeuGc, Alt |
EdwardsLab |
|---|---|---|
| Mouse Evidence | Composition closure of G45388GV via G58852GK | EdwardsLab |
| Rat Evidence | Composition closure of G97834OQ via G58852GK | EdwardsLab |
Molecular Weight
| PermethylatedMW | 536.29451047 | EdwardsLab |
|---|---|---|
| UnderivitizedMW | 424.16930991 | EdwardsLab |
| UnderivitizedMW | 424.16930973 | GlyTouCan |
Molecular Formula
| NativeMolecularFormula | C16H26N2O10 | EdwardsLab |
|---|---|---|
| PermethylatedMolecularFormula | C22H38N2O10 | EdwardsLab |
Classification
| GlycanSubtype | O-linked core 5 | GlycoMotif:GGM.001013 |
|---|---|---|
| GlycanType | O-linked | GlycoMotif:GGM.001013 |
Monosaccharide Counts
| GalNAcCount | 2 | EdwardsLab |
|---|---|---|
| HexNAcCount | 2 | EdwardsLab |
| MonosaccharideCount | 2 | EdwardsLab |
| MonosaccharideCount | 2 | GlyTouCan |
Cross Reference
| GlyGen | G00039MO | EdwardsLab |
|---|---|---|
| GNOme | G00039MO | GNOme |
| GlyCosmos | G00039MO | GlyCosmos |
| BCSDB | 20406, 25664 | GlyTouCan |
| CFG | carbSynthe_0072_D000 | GlyTouCan |
| Carbbank(CCSB) | 43965 | GlyTouCan |
| ChEBI | CHEBI:63230, CHEBI:73987, CHEBI:74036 | GlyTouCan |
| GLYCOSCIENCES.de | 609 | GlyTouCan |
| GlyConnectStructure | 500 | GlyTouCan |
| GlyTouCan | G00039MO | GlyTouCan |
| GlycomeDB | 484 | GlyTouCan |
| KEGG | G00030 | GlyTouCan |
| PubChem | CID91853465, SID252285892 | GlyTouCan |
| GlycO | GOG924 | GlycomeDB |
Publications
| Publication | 16630548, 19882123 | GlyTouCan |
|---|
Glycan Motif
| ClassMotif | GGM.001013, GGM.001014 | GlycoMotif |
|---|---|---|
| StrictClassMotif | GGM.001013, GGM.001014 | GlycoMotif |
Subsumption
| Ancestor | G00040MO, G23854HB, G27317MD, G27391WQ, G43482PE, G45388GV, G58852GK, G67375UD, G71838YU, G72539TP, G96636JK | GNOme |
|---|---|---|
| BaseComposition | G27391WQ | GNOme |
| Composition | G58852GK | GNOme |
| Level | Saccharide | GNOme |
| MissingScore | 0 | GNOme |
| SubsumedBy | G45388GV | GNOme |
| Topology | G23854HB | GNOme |
Glycan Structure
| Composition | false | EdwardsLab |
|---|---|---|
| FullyDetermined | true | EdwardsLab |
| HasMonosaccharide | GalNAc, HexNAc | EdwardsLab |
| HasRepeat | false | EdwardsLab |
| ReducingEnd | GalNAc, HexNAc | EdwardsLab |
| UndeterminedTopology | false | EdwardsLab |