G00041MO

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Sequence

GLYCAM-IUPAC

DGlcpNAcb1-6DGalpNAca1-OH

EdwardsLab
GlycoCT

RES 1b:a-dgal-HEX-1:5 2s:n-acetyl 3b:b-dglc-HEX-1:5 4s:n-acetyl LIN 1:1d(2+1)2n 2:1o(6+1)3d 3:3d(2+1)4n

GlyTouCan
GlycoWorkBench

redEnd--?a?D-a-D-Galp,p(--2NAc)--6b1D-b-D-Glcp,p--2NAc$MONO,perMe,Na,0,redEnd

EdwardsLab
IUPAC

beta-D-GlcpNAc-(1->6)-alpha-D-GalpNAc-(1->

EdwardsLab
IUPAC

beta-D-GlcpNAc-(1->6)-alpha-D-GalpNAc-(1->

GlyCosmos
WURCS

WURCS=2.0/2,2,1/[a2112h-1a_1-5_2*NCC/3=O][a2122h-1b_1-5_2*NCC/3=O]/1-2/a6-b1

GlyTouCan

Taxonomy

Taxonomy 9606 GlyConnectStructure:690

Species

Human Evidence GlyConnectStructure:690 TaxID 9606
No N-linked Xyl and no NeuGc, Alt
EdwardsLab
Mouse Evidence Composition closure of G91311MD via G94131HY EdwardsLab
Rat Evidence Composition closure of G00035MO via G94131HY
Composition closure of G00219VH via G94131HY
Composition closure of G85714GY via G94131HY
EdwardsLab

Molecular Weight

PermethylatedMW 536.29451047 EdwardsLab
UnderivitizedMW 424.16930991 EdwardsLab
UnderivitizedMW 424.16930973 GlyTouCan

Classification

GlycanSubtype O-linked core 6 GlycoMotif:GGM.001015
GlycanType O-linked GlycoMotif:GGM.001015

Monosaccharide Counts

GalNAcCount 1 EdwardsLab
GlcNAcCount 1 EdwardsLab
HexNAcCount 2 EdwardsLab
MonosaccharideCount 2 EdwardsLab
MonosaccharideCount 2 GlyTouCan

Cross Reference

GlyGen G00041MO EdwardsLab
GNOme G00041MO GNOme
GlyCosmos G00041MO GlyCosmos
CFG carbSynthe_0120_D000, carbSynthe_0697_D000 GlyTouCan
Carbbank(CCSB) 3346, 24323, 30846, 33121, 36262 GlyTouCan
ChEBI CHEBI:71411 GlyTouCan
GLYCOSCIENCES.de 3235, 7172, 17114, 23201 GlyTouCan
GlyConnectStructure 690 GlyTouCan
GlyTouCan G00041MO GlyTouCan
GlycomeDB 2484 GlyTouCan
KEGG G00031 GlyTouCan
PubChem CID56611864, SID252296995 GlyTouCan
GlycO GOG1236 GlycomeDB

Glycan Motif

ClassMotif GGM.001015, GGM.001016 GlycoMotif
StrictClassMotif GGM.001015, GGM.001016 GlycoMotif

Subsumption

Ancestor G00042MO, G27391WQ, G29636OK, G37619KE, G41063BN, G47318KU, G67375UD, G68646SF, G71838YU, G86947FH, G94131HY GNOme
BaseComposition G27391WQ GNOme
Composition G94131HY GNOme
Level Saccharide GNOme
MissingScore 0 GNOme
SubsumedBy G37619KE, G47318KU GNOme
Topology G86947FH GNOme

Glycan Structure

Composition false EdwardsLab
FullyDetermined true EdwardsLab
HasMonosaccharide GalNAc, GlcNAc, HexNAc EdwardsLab
HasRepeat false EdwardsLab
ReducingEnd GalNAc, HexNAc EdwardsLab
UndeterminedTopology false EdwardsLab