G00042MO

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Sequence

GlycoCT

RES 1b:x-dgal-HEX-x:x 2s:n-acetyl 3b:b-dglc-HEX-1:5 4s:n-acetyl LIN 1:1d(2+1)2n 2:1o(6+1)3d 3:3d(2+1)4n

GlyTouCan
GlycoWorkBench

redEnd--?D-?-D-Gal(--2NAc)--6b1D-b-D-Glcp,p--2NAc$MONO,perMe,Na,0,redEnd

EdwardsLab
IUPAC

beta-D-GlcpNAc-(1->6)-?-D-GalNAc

EdwardsLab
IUPAC

beta-D-GlcpNAc-(1->6)-D-GalNAc

GlyCosmos
WURCS

WURCS=2.0/2,2,1/[u2112h_2*NCC/3=O][a2122h-1b_1-5_2*NCC/3=O]/1-2/a6-b1

GlyTouCan

Taxonomy

Taxonomy 9606 GlyTouCan:G00042MO

Species

Human Evidence GlyTouCan:G00042MO TaxID 9606
No N-linked Xyl and no NeuGc, Alt
EdwardsLab
Mouse Evidence Composition closure of G91311MD via G94131HY EdwardsLab
Rat Evidence Composition closure of G00035MO via G94131HY
Composition closure of G00219VH via G94131HY
Composition closure of G85714GY via G94131HY
EdwardsLab

Molecular Weight

PermethylatedMW 536.29451047 EdwardsLab
UnderivitizedMW 424.16930991 EdwardsLab
UnderivitizedMW 424.16930973 GlyTouCan

Classification

GlycanSubtype O-linked core 6 GlycoMotif:GGM.001015
GlycanType O-linked GlycoMotif:GGM.001015

Monosaccharide Counts

GalNAcCount 1 EdwardsLab
GlcNAcCount 1 EdwardsLab
HexNAcCount 2 EdwardsLab
MonosaccharideCount 2 EdwardsLab
MonosaccharideCount 2 GlyTouCan

Cross Reference

GlyGen G00042MO EdwardsLab
GNOme G00042MO GNOme
GlyCosmos G00042MO GlyCosmos
Carbbank(CCSB) 29075, 37817, 49607 GlyTouCan
GLYCOSCIENCES.de 8547 GlyTouCan
GlyTouCan G00042MO GlyTouCan
GlycomeDB 6042 GlyTouCan

Glycan Motif

ClassMotif GGM.001015, GGM.001016 GlycoMotif
StrictClassMotif GGM.001016 GlycoMotif

Subsumption

Ancestor G27391WQ, G68646SF, G94131HY GNOme
BaseComposition G27391WQ GNOme
Composition G94131HY GNOme
Descendant G00041MO, G23447MZ, G37619KE GNOme
FullyDetermined G00041MO, G23447MZ GNOme
Level Saccharide GNOme
MissingScore 699 GNOme
SubsumedBy G68646SF GNOme
Subsumes G37619KE GNOme
Topology G68646SF GNOme

Glycan Structure

Composition false EdwardsLab
FullyDetermined true EdwardsLab
HasMonosaccharide GalNAc, GlcNAc, HexNAc EdwardsLab
HasRepeat false EdwardsLab
ReducingEnd GalNAc, HexNAc EdwardsLab
UndeterminedTopology false EdwardsLab