G00044MO

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Sequence

GlycoCT

RES 1b:x-dgal-HEX-x:x 2s:n-acetyl 3b:a-dgal-HEX-1:5 4s:n-acetyl LIN 1:1d(2+1)2n 2:1o(6+1)3d 3:3d(2+1)4n

GlyTouCan
GlycoWorkBench

redEnd--?D-?-D-Gal(--2NAc)--6a1D-a-D-Galp,p--2NAc$MONO,perMe,Na,0,redEnd

EdwardsLab
IUPAC

alpha-D-GalpNAc-(1->6)-?-D-GalNAc

EdwardsLab
IUPAC

alpha-D-GalpNAc-(1->6)-D-GalNAc

GlyCosmos
WURCS

WURCS=2.0/2,2,1/[u2112h_2*NCC/3=O][a2112h-1a_1-5_2*NCC/3=O]/1-2/a6-b1

GlyTouCan

Taxonomy

Taxonomy 9606 GlyTouCan:G00044MO

Species

Human Evidence GlyTouCan:G00044MO TaxID 9606
No N-linked Xyl and no NeuGc, Alt
EdwardsLab
Mouse Evidence Composition closure of G45388GV via G58852GK EdwardsLab
Rat Evidence Composition closure of G97834OQ via G58852GK EdwardsLab

Molecular Weight

PermethylatedMW 536.29451047 EdwardsLab
UnderivitizedMW 424.16930991 EdwardsLab
UnderivitizedMW 424.16930973 GlyTouCan

Classification

GlycanSubtype O-linked core 7 GlycoMotif:GGM.001017
GlycanType O-linked GlycoMotif:GGM.001017

Monosaccharide Counts

GalNAcCount 2 EdwardsLab
HexNAcCount 2 EdwardsLab
MonosaccharideCount 2 EdwardsLab
MonosaccharideCount 2 GlyTouCan

Cross Reference

GlyGen G00044MO EdwardsLab
GNOme G00044MO GNOme
GlyCosmos G00044MO GlyCosmos
Carbbank(CCSB) 29076, 49608 GlyTouCan
GLYCOSCIENCES.de 12819 GlyTouCan
GlyTouCan G00044MO GlyTouCan
GlycomeDB 8236 GlyTouCan

Glycan Motif

ClassMotif GGM.001017, GGM.001018 GlycoMotif
StrictClassMotif GGM.001018 GlycoMotif

Subsumption

Ancestor G27391WQ, G43482PE, G58852GK GNOme
BaseComposition G27391WQ GNOme
Composition G58852GK GNOme
Descendant G00043MO, G23652VU GNOme
FullyDetermined G00043MO GNOme
Level Saccharide GNOme
MissingScore 699 GNOme
SubsumedBy G43482PE GNOme
Subsumes G23652VU GNOme
Topology G43482PE GNOme

Glycan Structure

Composition false EdwardsLab
FullyDetermined true EdwardsLab
HasMonosaccharide GalNAc, HexNAc EdwardsLab
HasRepeat false EdwardsLab
ReducingEnd GalNAc, HexNAc EdwardsLab
UndeterminedTopology false EdwardsLab