G00048MO
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Sequence
| GLYCAM-IUPAC | LFucpa1-2DGalpb1-3[LFucpa1-4]DGlcpNAcb1-OH |
EdwardsLab |
|---|---|---|
| GlycoCT | RES 1b:b-dglc-HEX-1:5 2s:n-acetyl 3b:b-dgal-HEX-1:5 4b:a-lgal-HEX-1:5|6:d 5b:a-lgal-HEX-1:5|6:d LIN 1:1d(2+1)2n 2:1o(3+1)3d 3:3o(2+1)4d 4:1o(4+1)5d |
GlyTouCan |
| GlycoWorkBench | redEnd--?b?D-b-D-Glcp,p((--2NAc)--3b1D-b-D-Galp,p--2a1L-a-L-Fucp,p)--4a1L-a-L-Fucp,p$MONO,perMe,Na,0,redEnd |
EdwardsLab |
| IUPAC | alpha-L-Fucp-(1->2)-beta-D-Galp-(1->3)[alpha-L-Fucp-(1->4)]-beta-D-GlcpNAc-(1-> |
EdwardsLab |
| IUPAC | alpha-L-Fucp-(1->2)-beta-D-Galp-(1->3)[alpha-L-Fucp-(1->4)]-beta-D-GlcpNAc-(1-> |
GlyCosmos |
| WURCS | WURCS=2.0/3,4,3/[a2122h-1b_1-5_2*NCC/3=O][a2112h-1b_1-5][a1221m-1a_1-5]/1-2-3-3/a3-b1_a4-d1_b2-c1 |
GlyTouCan |
Taxonomy
| Taxonomy | 210, 9534, 9606, 9986, 10090 | GlyTouCan:G00048MO |
|---|
Species
| Human Evidence | GlyTouCan:G00048MO TaxID 9606 No N-linked Xyl and no NeuGc, Alt |
EdwardsLab |
|---|---|---|
| Mouse Evidence | GlyTouCan:G00048MO TaxID 10090 No N-linked Xyl and no Alt |
EdwardsLab |
| Rat Evidence | Composition closure of G00052MO via G22979OY | EdwardsLab |
Molecular Weight
| PermethylatedMW | 843.446379385 | EdwardsLab |
|---|---|---|
| UnderivitizedMW | 675.258578545 | EdwardsLab |
| UnderivitizedMW | 675.25857823 | GlyTouCan |
Monosaccharide Counts
| FucCount | 2 | EdwardsLab |
|---|---|---|
| GalCount | 1 | EdwardsLab |
| GlcNAcCount | 1 | EdwardsLab |
| HexCount | 1 | EdwardsLab |
| HexNAcCount | 1 | EdwardsLab |
| MonosaccharideCount | 4 | EdwardsLab |
| dHexCount | 2 | EdwardsLab |
| MonosaccharideCount | 4 | GlyTouCan |
Cross Reference
| GlyGen | G00048MO | EdwardsLab |
|---|---|---|
| GNOme | G00048MO | GNOme |
| GlyCosmos | G00048MO | GlyCosmos |
| BCSDB | 287 | GlyTouCan |
| CFG | carbSynthe_0023_D000, carbSynthe_0664_D000 | GlyTouCan |
| Carbbank(CCSB) | 609, 632, 2591, 2592, 3680, 4592, 7764, 10750, 11676, 14314, 14327, 14797, 14806, 14879, 15227, 15506, 16399, 17270, 19154, 19267, 20260, 23720, 28540, 28558, 28576, 28582, 28593, 30018, 32873, 33527, 33967, 34482, 34674, 34708, 34788, 34798, 34846, 34943, 34978, 34982, 35040, 36257, 36813, 36882, 36920, 36940, 37264, 37379, 38015, 42685, 42871, 42932, 43457, 43743, 44219, 44373, 44523, 44893, 45125, 45859, 45894, 45899, 46189, 46493, 46559, 47071, 47858, 48383, 49348, 49518, 49664, 50531, 50532 | GlyTouCan |
| ChEBI | CHEBI:59441 | GlyTouCan |
| GLYCOSCIENCES.de | 374, 1133, 3991, 4563, 5995, 6519, 6672, 19359 | GlyTouCan |
| GlyTouCan | G00048MO | GlyTouCan |
| GlycoEpitope | EP0010 | GlyTouCan |
| GlycomeDB | 315 | GlyTouCan |
| PDB | 1led, 4gwj | GlyTouCan |
| PubChem | CID45480569, SID252279306 | GlyTouCan |
| UniCarb-DB | 225 | GlyTouCan |
Publications
| Publication | 1306106, 1609521, 1732113, 2429066, 2460087, 3510728, 3516890, 7309759, 8038519, 8340252, 9076517, 10393028, 10992504, 12213787 | GlyTouCan |
|---|
Glycan Motif
| Motif | GGM.000005, GGM.000020, GGM.000021 | GlycoMotif |
|---|---|---|
| StrictMotif | GGM.000005, GGM.000020, GGM.000021 | GlycoMotif |
Subsumption
| Ancestor | G17991UN, G20009SF, G22979OY, G27653YS, G36592JW, G39211DH, G39442TM, G50093PV, G68835PZ, G70505CA, G81216LK, G82458HY, G93507IP | GNOme |
|---|---|---|
| BaseComposition | G82458HY | GNOme |
| Composition | G22979OY | GNOme |
| Level | Saccharide | GNOme |
| MissingScore | 0 | GNOme |
| SubsumedBy | G20009SF, G39211DH, G50093PV | GNOme |
| Topology | G27653YS | GNOme |
Glycan Structure
| Composition | false | EdwardsLab |
|---|---|---|
| FullyDetermined | true | EdwardsLab |
| HasMonosaccharide | Fuc, Gal, GlcNAc, Hex, HexNAc, dHex | EdwardsLab |
| HasRepeat | false | EdwardsLab |
| ReducingEnd | GlcNAc, HexNAc | EdwardsLab |
| UndeterminedTopology | false | EdwardsLab |