G00050MO
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Sequence
GLYCAM-IUPAC | LFucpa1-2DGalpb1-3DGlcpNAcb1-3DGalpb1-4DGlcpb1-OH |
EdwardsLab |
---|---|---|
GlycoCT | RES 1b:b-dglc-HEX-1:5 2b:b-dgal-HEX-1:5 3b:b-dglc-HEX-1:5 4s:n-acetyl 5b:b-dgal-HEX-1:5 6b:a-lgal-HEX-1:5|6:d LIN 1:1o(4+1)2d 2:2o(3+1)3d 3:3d(2+1)4n 4:3o(3+1)5d 5:5o(2+1)6d |
GlyTouCan |
GlycoWorkBench | redEnd--?b?D-b-D-Glcp,p--4b1D-b-D-Galp,p--3b1D-b-D-Glcp,p(--2NAc)--3b1D-b-D-Galp,p--2a1L-a-L-Fucp,p$MONO,perMe,Na,0,redEnd |
EdwardsLab |
IUPAC | alpha-L-Fucp-(1->2)-beta-D-Galp-(1->3)-beta-D-GlcpNAc-(1->3)-beta-D-Galp-(1->4)-beta-D-Glcp-(1-> |
EdwardsLab |
IUPAC | alpha-L-Fucp-(1->2)-beta-D-Galp-(1->3)-beta-D-GlcpNAc-(1->3)-beta-D-Galp-(1->4)-beta-D-Glcp-(1-> |
GlyCosmos |
WURCS | WURCS=2.0/4,5,4/[a2122h-1b_1-5][a2112h-1b_1-5][a2122h-1b_1-5_2*NCC/3=O][a1221m-1a_1-5]/1-2-3-2-4/a4-b1_b3-c1_c3-d1_d2-e1 |
GlyTouCan |
Taxonomy
Taxonomy | 9606, 9823, 10090, 10114 | GlyTouCan:G00050MO |
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Species
Human Evidence | GlyTouCan:G00050MO TaxID 9606 No N-linked Xyl and no NeuGc, Alt |
EdwardsLab |
---|---|---|
Mouse Evidence | GlyTouCan:G00050MO TaxID 10090 No N-linked Xyl and no Alt |
EdwardsLab |
Rat Evidence | GlyTouCan:G00050MO TaxID 10114 No N-linked Xyl and no Alt |
EdwardsLab |
Molecular Weight
PermethylatedMW | 1077.5567178 | EdwardsLab |
---|---|---|
UnderivitizedMW | 853.306316675 | EdwardsLab |
UnderivitizedMW | 853.30631628 | GlyTouCan |
Classification
GlycanSubtype | Glycosphingolipid lacto series | GlycoMotif:GGM.001106 |
---|---|---|
GlycanType | Glycosphingolipid | GlycoMotif:GGM.001106 |
Monosaccharide Counts
FucCount | 1 | EdwardsLab |
---|---|---|
GalCount | 2 | EdwardsLab |
GlcCount | 1 | EdwardsLab |
GlcNAcCount | 1 | EdwardsLab |
HexCount | 3 | EdwardsLab |
HexNAcCount | 1 | EdwardsLab |
MonosaccharideCount | 5 | EdwardsLab |
dHexCount | 1 | EdwardsLab |
MonosaccharideCount | 5 | GlyTouCan |
Cross Reference
GlyGen | G00050MO | EdwardsLab |
---|---|---|
GNOme | G00050MO | GNOme |
GlyCosmos | G00050MO | GlyCosmos |
CFG | carbSynthe_0027_D000, carbSynthe_0829_D000, carbSynthe_0830_D000 | GlyTouCan |
Carbbank(CCSB) | 706, 707, 2603, 8360, 8723, 11647, 14076, 14545, 14898, 15609, 16293, 16566, 18203, 18420, 18437, 19508, 21071, 21321, 21741, 21883, 21903, 22779, 25513, 29099, 33616, 35052, 35061, 40777, 42842, 43866, 50200, 50492 | GlyTouCan |
ChEBI | CHEBI:65276 | GlyTouCan |
GLYCOSCIENCES.de | 687, 8309, 17667, 17678 | GlyTouCan |
GlyTouCan | G00050MO | GlyTouCan |
GlycomeDB | 545 | GlyTouCan |
KEGG | G00044 | GlyTouCan |
PDB | 2zl6, 3sln | GlyTouCan |
PubChem | CID70678645, SID252285322 | GlyTouCan |
GlycO | GOG1063 | GlycomeDB |
Glycan Motif
ClassMotif | GGM.001106 | GlycoMotif |
---|---|---|
Motif | GGM.000005, GGM.000042 | GlycoMotif |
StrictClassMotif | GGM.001106 | GlycoMotif |
StrictMotif | GGM.000005, GGM.000042 | GlycoMotif |
Subsumption
Ancestor | G01650PH, G05897GU, G07322TJ, G14307WQ, G19490AF, G29900GO, G33355QW, G35406BC, G41416MJ, G54630CD, G82935CH, G84985UI, G88572NY | GNOme |
---|---|---|
BaseComposition | G54630CD | GNOme |
Composition | G82935CH | GNOme |
Level | Saccharide | GNOme |
MissingScore | 0 | GNOme |
SubsumedBy | G01650PH, G41416MJ | GNOme |
Topology | G29900GO | GNOme |
Glycan Structure
Composition | false | EdwardsLab |
---|---|---|
FullyDetermined | true | EdwardsLab |
HasMonosaccharide | Fuc, Gal, Glc, GlcNAc, Hex, HexNAc, dHex | EdwardsLab |
HasRepeat | false | EdwardsLab |
ReducingEnd | Glc, Hex | EdwardsLab |
UndeterminedTopology | false | EdwardsLab |