G00050MO
Jump to navigation
Jump to search
Sequence
| GLYCAM-IUPAC | LFucpa1-2DGalpb1-3DGlcpNAcb1-3DGalpb1-4DGlcpb1-OH |
EdwardsLab |
|---|---|---|
| GlycoCT | RES 1b:b-dglc-HEX-1:5 2b:b-dgal-HEX-1:5 3b:b-dglc-HEX-1:5 4s:n-acetyl 5b:b-dgal-HEX-1:5 6b:a-lgal-HEX-1:5|6:d LIN 1:1o(4+1)2d 2:2o(3+1)3d 3:3d(2+1)4n 4:3o(3+1)5d 5:5o(2+1)6d |
GlyTouCan |
| GlycoWorkBench | freeEnd--1b1D-Glc,p--4b1D-Gal,p--3b1D-GlcNAc,p--3b1D-Gal,p--2a1L-Fuc,p$MONO,Und,0,0,freeEnd |
EdwardsLab |
| IUPAC | alpha-L-Fucp-(1->2)-beta-D-Galp-(1->3)-beta-D-GlcpNAc-(1->3)-beta-D-Galp-(1->4)-beta-D-Glcp-(1-> |
EdwardsLab |
| IUPAC | alpha-L-Fucp-(1->2)-beta-D-Galp-(1->3)-beta-D-GlcpNAc-(1->3)-beta-D-Galp-(1->4)-beta-D-Glcp-(1-> |
GlyCosmos |
| WURCS | WURCS=2.0/4,5,4/[a2122h-1b_1-5][a2112h-1b_1-5][a2122h-1b_1-5_2*NCC/3=O][a1221m-1a_1-5]/1-2-3-2-4/a4-b1_b3-c1_c3-d1_d2-e1 |
GlyTouCan |
Taxonomy
| Taxonomy | 9606, 9823, 10090, 10114 | GlyCosmos:G00050MO |
|---|
Species
| Human Evidence | GlyCosmos:G00050MO TaxID 9606 No N-linked Xyl and no NeuGc, Alt |
EdwardsLab |
|---|---|---|
| Mouse Evidence | GlyCosmos:G00050MO TaxID 10090 No N-linked Xyl and no Alt |
EdwardsLab |
| Rat Evidence | GlyCosmos:G00050MO TaxID 10114 No N-linked Xyl and no Alt |
EdwardsLab |
Molecular Weight
| PermethylatedMW | 1077.5567178 | EdwardsLab |
|---|---|---|
| UnderivitizedMW | 853.306316675 | EdwardsLab |
| UnderivitizedMW | 853.30631628 | GlyTouCan |
Classification
| GlycanSubtype | Glycosphingolipid lacto series | GlycoMotif:GGM.001106 |
|---|---|---|
| GlycanType | Glycosphingolipid | GlycoMotif:GGM.001106 |
Monosaccharide Counts
| FucCount | 1 | EdwardsLab |
|---|---|---|
| GalCount | 2 | EdwardsLab |
| GlcCount | 1 | EdwardsLab |
| GlcNAcCount | 1 | EdwardsLab |
| HexCount | 3 | EdwardsLab |
| HexNAcCount | 1 | EdwardsLab |
| MonosaccharideCount | 5 | EdwardsLab |
| dHexCount | 1 | EdwardsLab |
| MonosaccharideCount | 5 | GlyTouCan |
Cross Reference
| GlyGen | G00050MO | EdwardsLab |
|---|---|---|
| GNOme | G00050MO | GNOme |
| GlyCosmos | G00050MO | GlyCosmos |
| CFG | carbSynthe_0027_D000, carbSynthe_0829_D000, carbSynthe_0830_D000 | GlyTouCan |
| Carbbank(CCSB) | 706, 707, 2603, 8360, 8723, 11647, 14076, 14545, 14898, 15609, 16293, 16566, 18203, 18420, 18437, 19508, 21071, 21321, 21741, 21883, 21903, 22779, 25513, 29099, 33616, 35052, 35061, 40777, 42842, 43866, 50200, 50492 | GlyTouCan |
| ChEBI | CHEBI:65276 | GlyTouCan |
| GLYCOSCIENCES.de | 687, 8309, 17667, 17678 | GlyTouCan |
| GlyTouCan | G00050MO | GlyTouCan |
| GlycomeDB | 545 | GlyTouCan |
| KEGG | G00044 | GlyTouCan |
| PDB | 2zl6, 3sln | GlyTouCan |
| PubChem | CID70678645, SID252285322 | GlyTouCan |
| GlycO | GOG1063 | GlycomeDB |
Glycan Motif
| ClassMotif | GGM.001029, GGM.001106 | GlycoMotif |
|---|---|---|
| Motif | GGM.000005, GGM.000042 | GlycoMotif |
| StrictClassMotif | GGM.001029, GGM.001106 | GlycoMotif |
| StrictMotif | GGM.000005, GGM.000042 | GlycoMotif |
Subsumption
| Ancestor | G01650PH, G05897GU, G07322TJ, G14307WQ, G19490AF, G29900GO, G33355QW, G35406BC, G41416MJ, G54630CD, G82935CH, G84985UI, G88572NY | GNOme |
|---|---|---|
| BaseComposition | G54630CD | GNOme |
| Composition | G82935CH | GNOme |
| Level | Saccharide | GNOme |
| MissingScore | 0 | GNOme |
| SubsumedBy | G01650PH, G41416MJ | GNOme |
| Topology | G29900GO | GNOme |
Glycan Structure
| Composition | false | EdwardsLab |
|---|---|---|
| FullyDetermined | true | EdwardsLab |
| HasMonosaccharide | Fuc, Gal, Glc, GlcNAc, Hex, HexNAc, dHex | EdwardsLab |
| HasRepeat | false | EdwardsLab |
| ReducingEnd | Glc, Hex | EdwardsLab |
| UndeterminedTopology | false | EdwardsLab |