G00052MO

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Sequence

GLYCAM-IUPAC

LFucpa1-2DGalpb1-4[LFucpa1-3]DGlcpNAcb1-OH

EdwardsLab
GlycoCT

RES 1b:b-dglc-HEX-1:5 2s:n-acetyl 3b:a-lgal-HEX-1:5|6:d 4b:b-dgal-HEX-1:5 5b:a-lgal-HEX-1:5|6:d LIN 1:1d(2+1)2n 2:1o(3+1)3d 3:1o(4+1)4d 4:4o(2+1)5d

GlyTouCan
GlycoWorkBench

redEnd--?b?D-b-D-Glcp,p((--2NAc)--3a1L-a-L-Fucp,p)--4b1D-b-D-Galp,p--2a1L-a-L-Fucp,p$MONO,perMe,Na,0,redEnd

EdwardsLab
IUPAC

alpha-L-Fucp-(1->2)-beta-D-Galp-(1->4)[alpha-L-Fucp-(1->3)]-beta-D-GlcpNAc-(1->

EdwardsLab
IUPAC

alpha-L-Fucp-(1->2)-beta-D-Galp-(1->4)[alpha-L-Fucp-(1->3)]-beta-D-GlcpNAc-(1->

GlyCosmos
WURCS

WURCS=2.0/3,4,3/[a2122h-1b_1-5_2*NCC/3=O][a1221m-1a_1-5][a2112h-1b_1-5]/1-2-3-2/a3-b1_a4-c1_c2-d1

GlyTouCan

Taxonomy

Taxonomy 210, 9534, 9606, 9615, 9685, 9823, 9913, 9986, 10036, 10090, 10114, 11676, 12721, 85962, 102617 GlyTouCan:G00052MO

Species

Human Evidence GlyTouCan:G00052MO TaxID 9606
No N-linked Xyl and no NeuGc, Alt
EdwardsLab
Mouse Evidence GlyTouCan:G00052MO TaxID 10090
No N-linked Xyl and no Alt
EdwardsLab
Rat Evidence GlyTouCan:G00052MO TaxID 10114
No N-linked Xyl and no Alt
EdwardsLab

Molecular Weight

PermethylatedMW 843.446379385 EdwardsLab
UnderivitizedMW 675.258578545 EdwardsLab
UnderivitizedMW 675.25857823 GlyTouCan

Monosaccharide Counts

FucCount 2 EdwardsLab
GalCount 1 EdwardsLab
GlcNAcCount 1 EdwardsLab
HexCount 1 EdwardsLab
HexNAcCount 1 EdwardsLab
MonosaccharideCount 4 EdwardsLab
dHexCount 2 EdwardsLab
MonosaccharideCount 4 GlyTouCan

Cross Reference

GlyGen G00052MO EdwardsLab
GNOme G00052MO GNOme
GlyCosmos G00052MO GlyCosmos
BCSDB 285, 3526, 6361, 6366, 7539, 7822, 8803, 10243, 10704 GlyTouCan
CFG carbSynthe_0087_D000, carbSynthe_0523_D000, carbSynthe_0524_D000, carbSynthe_0671_D000, carbSynthe_0672_D000 GlyTouCan
Carbbank(CCSB) 329, 642, 2537, 2538, 2539, 3605, 4591, 7421, 7648, 7781, 7847, 10751, 14878, 15221, 16398, 20238, 22552, 22553, 22554, 22555, 23607, 25838, 27637, 28542, 28578, 28581, 28594, 29591, 34222, 34676, 34848, 34944, 34976, 34984, 35241, 35825, 35841, 36884, 36921, 36945, 37036, 37265, 38055, 41388, 42058, 42330, 42425, 42873, 42934, 43451, 43710, 44221, 44361, 44371, 44543, 45121, 45320, 45465, 45861, 45867, 45900, 45905, 46554, 46775, 47008, 47073, 47183, 47330, 47457, 48385, 48510, 48721, 49120, 49149, 49439, 50275, 50533 GlyTouCan
ChEBI CHEBI:59045, CHEBI:59047 GlyTouCan
GLYCOSCIENCES.de 373, 1132, 2037, 2172, 4562, 8051, 9152, 14249, 19255, 19256, 19257, 19258 GlyTouCan
GlyTouCan G00052MO GlyTouCan
GlycoEpitope EP0018 GlyTouCan
GlycomeDB 314 GlyTouCan
PDB 1gsl, 2j1t, 2wmg, 3leg, 3pa2, 4gwi GlyTouCan
PubChem CID45266908, SID252284113 GlyTouCan
UniCarb-DB 366 GlyTouCan

Publications

Publication 1370643, 1736686, 1972718, 2119368, 2400995, 2416034, 2432062, 2537068, 2663606, 2665636, 3112156, 3166398, 3258005, 3510728, 6094178, 6188690, 6189529, 6194156, 6667675, 7780013, 7809154, 8038519, 8095932, 8340252, 8417827, 8621218, 8625220, 9076517, 9399674, 9565568, 10096092, 10712696, 10992504, 11479278, 12031100, 12213787, 16030209, 16234847, 17607374 GlyTouCan

Glycan Motif

Motif GGM.000001, GGM.000018, GGM.000019, GGM.000045 GlycoMotif
StrictMotif GGM.000001, GGM.000018, GGM.000019, GGM.000045 GlycoMotif

Subsumption

Ancestor G04690JX, G17991UN, G20009SF, G22979OY, G27653YS, G35534DU, G36592JW, G39442TM, G49963IQ, G68835PZ, G70505CA, G81216LK, G82458HY, G96179XD GNOme
BaseComposition G82458HY GNOme
Composition G22979OY GNOme
Level Saccharide GNOme
MissingScore 0 GNOme
SubsumedBy G20009SF, G35534DU, G49963IQ, G96179XD GNOme
Topology G27653YS GNOme

Glycan Structure

Composition false EdwardsLab
FullyDetermined true EdwardsLab
HasMonosaccharide Fuc, Gal, GlcNAc, Hex, HexNAc, dHex EdwardsLab
HasRepeat false EdwardsLab
ReducingEnd GlcNAc, HexNAc EdwardsLab
UndeterminedTopology false EdwardsLab