G00053MO

From GlycanData
Jump to navigation Jump to search

Sequence

GLYCAM-IUPAC

DNeup5Aca2-3DGalpb1-3[LFucpa1-4]DGlcpNAcb1-OH

EdwardsLab
GlycoCT

RES 1b:b-dglc-HEX-1:5 2s:n-acetyl 3b:b-dgal-HEX-1:5 4b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 5s:n-acetyl 6b:a-lgal-HEX-1:5|6:d LIN 1:1d(2+1)2n 2:1o(3+1)3d 3:3o(3+2)4d 4:4d(5+1)5n 5:1o(4+1)6d

GlyTouCan
GlycoWorkBench

redEnd--?b?D-b-D-Glcp,p((--2NAc)--3b1D-b-D-Galp,p--3a2D-a-D-Neup,p--5NAc)--4a1L-a-L-Fucp,p$MONO,perMe,Na,0,redEnd

EdwardsLab
IUPAC

alpha-D-Neup5Ac-(2->3)-beta-D-Galp-(1->3)[alpha-L-Fucp-(1->4)]-beta-D-GlcpNAc-(1->

EdwardsLab
IUPAC

alpha-D-Neup5Ac-(2->3)-beta-D-Galp-(1->3)[alpha-L-Fucp-(1->4)]-beta-D-GlcpNAc-(1->

GlyCosmos
WURCS

WURCS=2.0/4,4,3/[a2122h-1b_1-5_2*NCC/3=O][a2112h-1b_1-5][Aad21122h-2a_2-6_5*NCC/3=O][a1221m-1a_1-5]/1-2-3-4/a3-b1_a4-d1_b3-c2

GlyTouCan

Taxonomy

Taxonomy 9606, 10090 GlyTouCan:G00053MO

Species

FruitFly Evidence Composition closure of G39294YF via G58879PQ EdwardsLab
Human Evidence GlyTouCan:G00053MO TaxID 9606
No N-linked Xyl and no NeuGc, Alt
EdwardsLab
Mouse Evidence GlyTouCan:G00053MO TaxID 10090
No N-linked Xyl and no Alt
EdwardsLab
Rat Evidence Composition closure of G00054MO via G58879PQ EdwardsLab

Molecular Weight

PermethylatedMW 1030.53083736 EdwardsLab
UnderivitizedMW 820.29608631 EdwardsLab
UnderivitizedMW 820.29608594 GlyTouCan

Monosaccharide Counts

FucCount 1 EdwardsLab
GalCount 1 EdwardsLab
GlcNAcCount 1 EdwardsLab
HexCount 1 EdwardsLab
HexNAcCount 1 EdwardsLab
MonosaccharideCount 4 EdwardsLab
NeuAcCount 1 EdwardsLab
SiaCount 1 EdwardsLab
dHexCount 1 EdwardsLab
MonosaccharideCount 4 GlyTouCan

Cross Reference

GlyGen G00053MO EdwardsLab
GNOme G00053MO GNOme
GlyCosmos G00053MO GlyCosmos
CFG carbSynthe_0726_D000, carbSynthe_464_D000 GlyTouCan
Carbbank(CCSB) 1826, 7801, 20132, 29470, 30050, 30266, 32082, 34677, 34706, 34711, 34849, 34854, 34911, 34940, 34981, 35098, 35281, 35786, 35787, 35802, 36202, 36252, 36817, 36906, 36939, 37262, 38130, 38311, 38703, 40729, 42427, 42495, 42582, 42750, 42773, 42789, 43018, 43027, 43029, 43459, 43475, 43602, 43809, 43877, 44015, 44277, 44510, 44542, 45109, 45858, 45865, 45869, 45885, 45901, 46024, 46224, 46228, 46391, 46450, 46556, 46896, 47459, 47793, 48235, 49052, 49147, 49515, 49539, 49663, 50462 GlyTouCan
ChEBI CHEBI:62681 GlyTouCan
GLYCOSCIENCES.de 150, 4541, 6668, 9300, 13410, 14057 GlyTouCan
GlyTouCan G00053MO GlyTouCan
GlycoEpitope EP0008 GlyTouCan
GlycomeDB 130 GlyTouCan
PubChem CID53356732, SID252276065 GlyTouCan

Publications

Publication 1678888, 1698709, 1714447, 1716885, 2097812, 2111348, 2318868, 2355641, 2466827, 3162916, 3476183, 3498891, 3592664, 6926850, 7142214, 7678075, 7687590, 7697593, 7901202, 8253783, 9298690, 10436809, 12820726, 15330211, 20954701 GlyTouCan

Glycan Motif

Motif GGM.000005, GGM.000020, GGM.000024 GlycoMotif
StrictMotif GGM.000005, GGM.000020, GGM.000024 GlycoMotif

Subsumption

Ancestor G01010HI, G05917SW, G11499FP, G12750SG, G12942ZN, G13065CP, G15602PX, G16258KS, G16340GB, G16746MI, G22933CR, G25705KO, G42932DS, G43415ON, G58879PQ, G66768WN, G81971FM, G88888LR, G95160NQ, G98896IU GNOme
BaseComposition G42932DS GNOme
Composition G58879PQ GNOme
Level Saccharide GNOme
MissingScore 0 GNOme
SubsumedBy G16746MI, G81971FM GNOme
Topology G12750SG GNOme

Glycan Structure

Composition false EdwardsLab
FullyDetermined true EdwardsLab
HasMonosaccharide Fuc, Gal, GlcNAc, Hex, HexNAc, NeuAc, Sia, dHex EdwardsLab
HasRepeat false EdwardsLab
ReducingEnd GlcNAc, HexNAc EdwardsLab
UndeterminedTopology false EdwardsLab