G00063MO
Sequence
GLYCAM-IUPAC | DNeup5Aca2-3[DGalpNAcb1-4]DGalpb1-3[DNeup5Aca2-6]DGalpNAcb1-OH |
EdwardsLab |
---|---|---|
GlycoCT | RES 1b:b-dgal-HEX-1:5 2s:n-acetyl 3b:b-dgal-HEX-1:5 4b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 5s:n-acetyl 6b:b-dgal-HEX-1:5 7s:n-acetyl 8b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 9s:n-acetyl LIN 1:1d(2+1)2n 2:1o(3+1)3d 3:3o(3+2)4d 4:4d(5+1)5n 5:3o(4+1)6d 6:6d(2+1)7n 7:1o(6+2)8d 8:8d(5+1)9n |
GlyTouCan |
GlycoWorkBench | redEnd--?b?D-b-D-Galp,p((--2NAc)--3b1D-b-D-Galp,p(--3a2D-a-D-Neup,p--5NAc)--4b1D-b-D-Galp,p--2NAc)--6a2D-a-D-Neup,p--5NAc$MONO,perMe,Na,0,redEnd |
EdwardsLab |
IUPAC | alpha-D-Neup5Ac-(2->3)[beta-D-GalpNAc-(1->4)]-beta-D-Galp-(1->3)[alpha-D-Neup5Ac-(2->6)]-beta-D-GalpNAc-(1-> |
EdwardsLab |
IUPAC | alpha-D-Neup5Ac-(2->3)[beta-D-GalpNAc-(1->4)]-beta-D-Galp-(1->3)[alpha-D-Neup5Ac-(2->6)]-beta-D-GalpNAc-(1-> |
GlyCosmos |
WURCS | WURCS=2.0/3,5,4/[a2112h-1b_1-5_2*NCC/3=O][a2112h-1b_1-5][Aad21122h-2a_2-6_5*NCC/3=O]/1-2-3-1-3/a3-b1_a6-e2_b3-c2_b4-d1 |
GlyTouCan |
Taxonomy
Taxonomy | 9606 | GlyTouCan:G00063MO |
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Species
Human Evidence | GlyTouCan:G00063MO TaxID 9606 No N-linked Xyl and no NeuGc, Alt |
EdwardsLab |
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Molecular Weight
PermethylatedMW | 1462.74161815 | EdwardsLab |
---|---|---|
UnderivitizedMW | 1168.41296668 | EdwardsLab |
UnderivitizedMW | 1168.4129662 | GlyTouCan |
Classification
GlycanSubtype | O-linked core 1 | GlycoMotif:GGM.001006 |
---|---|---|
GlycanType | O-linked | GlycoMotif:GGM.001006 |
Monosaccharide Counts
GalCount | 1 | EdwardsLab |
---|---|---|
GalNAcCount | 2 | EdwardsLab |
HexCount | 1 | EdwardsLab |
HexNAcCount | 2 | EdwardsLab |
MonosaccharideCount | 5 | EdwardsLab |
NeuAcCount | 2 | EdwardsLab |
SiaCount | 2 | EdwardsLab |
MonosaccharideCount | 5 | GlyTouCan |
Cross Reference
GlyGen | G00063MO | EdwardsLab |
---|---|---|
GNOme | G00063MO | GNOme |
GlyCosmos | G00063MO | GlyCosmos |
Carbbank(CCSB) | 26749 | GlyTouCan |
GLYCOSCIENCES.de | 6660, 25734 | GlyTouCan |
GlyTouCan | G00063MO | GlyTouCan |
GlycomeDB | 4701 | GlyTouCan |
PubChem | CID91853411, SID252285826 | GlyTouCan |
Glycan Motif
ClassMotif | GGM.001006 | GlycoMotif |
---|---|---|
Motif | GGM.000035 | GlycoMotif |
StrictClassMotif | GGM.001006 | GlycoMotif |
StrictMotif | GGM.000035 | GlycoMotif |
Subsumption
Ancestor | G03476LE, G07293JT, G10057RC, G12520SZ, G27562JG, G31008GE, G60382VE, G99269VU | GNOme |
---|---|---|
BaseComposition | G10057RC | GNOme |
Composition | G03476LE | GNOme |
Level | Saccharide | GNOme |
MissingScore | 0 | GNOme |
SubsumedBy | G07293JT | GNOme |
Topology | G31008GE | GNOme |
Glycan Structure
Composition | false | EdwardsLab |
---|---|---|
FullyDetermined | true | EdwardsLab |
HasMonosaccharide | Gal, GalNAc, Hex, HexNAc, NeuAc, Sia | EdwardsLab |
HasRepeat | false | EdwardsLab |
ReducingEnd | GalNAc, HexNAc | EdwardsLab |
UndeterminedTopology | false | EdwardsLab |