G00063MO

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Sequence

GLYCAM-IUPAC

DNeup5Aca2-3[DGalpNAcb1-4]DGalpb1-3[DNeup5Aca2-6]DGalpNAcb1-OH

EdwardsLab
GlycoCT

RES 1b:b-dgal-HEX-1:5 2s:n-acetyl 3b:b-dgal-HEX-1:5 4b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 5s:n-acetyl 6b:b-dgal-HEX-1:5 7s:n-acetyl 8b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 9s:n-acetyl LIN 1:1d(2+1)2n 2:1o(3+1)3d 3:3o(3+2)4d 4:4d(5+1)5n 5:3o(4+1)6d 6:6d(2+1)7n 7:1o(6+2)8d 8:8d(5+1)9n

GlyTouCan
GlycoWorkBench

redEnd--?b?D-b-D-Galp,p((--2NAc)--3b1D-b-D-Galp,p(--3a2D-a-D-Neup,p--5NAc)--4b1D-b-D-Galp,p--2NAc)--6a2D-a-D-Neup,p--5NAc$MONO,perMe,Na,0,redEnd

EdwardsLab
IUPAC

alpha-D-Neup5Ac-(2->3)[beta-D-GalpNAc-(1->4)]-beta-D-Galp-(1->3)[alpha-D-Neup5Ac-(2->6)]-beta-D-GalpNAc-(1->

EdwardsLab
IUPAC

alpha-D-Neup5Ac-(2->3)[beta-D-GalpNAc-(1->4)]-beta-D-Galp-(1->3)[alpha-D-Neup5Ac-(2->6)]-beta-D-GalpNAc-(1->

GlyCosmos
WURCS

WURCS=2.0/3,5,4/[a2112h-1b_1-5_2*NCC/3=O][a2112h-1b_1-5][Aad21122h-2a_2-6_5*NCC/3=O]/1-2-3-1-3/a3-b1_a6-e2_b3-c2_b4-d1

GlyTouCan

Taxonomy

Taxonomy 9606 GlyTouCan:G00063MO

Species

Human Evidence GlyTouCan:G00063MO TaxID 9606
No N-linked Xyl and no NeuGc, Alt
EdwardsLab

Molecular Weight

PermethylatedMW 1462.74161815 EdwardsLab
UnderivitizedMW 1168.41296668 EdwardsLab
UnderivitizedMW 1168.4129662 GlyTouCan

Classification

GlycanSubtype O-linked core 1 GlycoMotif:GGM.001006
GlycanType O-linked GlycoMotif:GGM.001006

Monosaccharide Counts

GalCount 1 EdwardsLab
GalNAcCount 2 EdwardsLab
HexCount 1 EdwardsLab
HexNAcCount 2 EdwardsLab
MonosaccharideCount 5 EdwardsLab
NeuAcCount 2 EdwardsLab
SiaCount 2 EdwardsLab
MonosaccharideCount 5 GlyTouCan

Cross Reference

GlyGen G00063MO EdwardsLab
GNOme G00063MO GNOme
GlyCosmos G00063MO GlyCosmos
Carbbank(CCSB) 26749 GlyTouCan
GLYCOSCIENCES.de 6660, 25734 GlyTouCan
GlyTouCan G00063MO GlyTouCan
GlycomeDB 4701 GlyTouCan
PubChem CID91853411, SID252285826 GlyTouCan

Glycan Motif

ClassMotif GGM.001006 GlycoMotif
Motif GGM.000035 GlycoMotif
StrictClassMotif GGM.001006 GlycoMotif
StrictMotif GGM.000035 GlycoMotif

Subsumption

Ancestor G03476LE, G07293JT, G10057RC, G12520SZ, G27562JG, G31008GE, G60382VE, G99269VU GNOme
BaseComposition G10057RC GNOme
Composition G03476LE GNOme
Level Saccharide GNOme
MissingScore 0 GNOme
SubsumedBy G07293JT GNOme
Topology G31008GE GNOme

Glycan Structure

Composition false EdwardsLab
FullyDetermined true EdwardsLab
HasMonosaccharide Gal, GalNAc, Hex, HexNAc, NeuAc, Sia EdwardsLab
HasRepeat false EdwardsLab
ReducingEnd GalNAc, HexNAc EdwardsLab
UndeterminedTopology false EdwardsLab