G00063MO
Sequence
| GLYCAM-IUPAC | DNeup5Aca2-3[DGalpNAcb1-4]DGalpb1-3[DNeup5Aca2-6]DGalpNAcb1-OH |
EdwardsLab |
|---|---|---|
| GlycoCT | RES 1b:b-dgal-HEX-1:5 2s:n-acetyl 3b:b-dgal-HEX-1:5 4b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 5s:n-acetyl 6b:b-dgal-HEX-1:5 7s:n-acetyl 8b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 9s:n-acetyl LIN 1:1d(2+1)2n 2:1o(3+1)3d 3:3o(3+2)4d 4:4d(5+1)5n 5:3o(4+1)6d 6:6d(2+1)7n 7:1o(6+2)8d 8:8d(5+1)9n |
GlyTouCan |
| GlycoWorkBench | freeEnd--1b1D-GalNAc,p(--3b1D-Gal,p(--3a2D-NeuAc,p)--4b1D-GalNAc,p)--6a2D-NeuAc,p$MONO,Und,0,0,freeEnd |
EdwardsLab |
| IUPAC | alpha-D-Neup5Ac-(2->3)[beta-D-GalpNAc-(1->4)]-beta-D-Galp-(1->3)[alpha-D-Neup5Ac-(2->6)]-beta-D-GalpNAc-(1-> |
EdwardsLab |
| IUPAC | alpha-D-Neup5Ac-(2->3)[beta-D-GalpNAc-(1->4)]-beta-D-Galp-(1->3)[alpha-D-Neup5Ac-(2->6)]-beta-D-GalpNAc-(1-> |
GlyCosmos |
| WURCS | WURCS=2.0/3,5,4/[a2112h-1b_1-5_2*NCC/3=O][a2112h-1b_1-5][Aad21122h-2a_2-6_5*NCC/3=O]/1-2-3-1-3/a3-b1_a6-e2_b3-c2_b4-d1 |
GlyTouCan |
Taxonomy
| Taxonomy | 9606 | GlyCosmos:G00063MO |
|---|
Species
| Human Evidence | GlyCosmos:G00063MO TaxID 9606 No N-linked Xyl and no NeuGc, Alt |
EdwardsLab |
|---|---|---|
| Mouse Evidence | Composition closure of G16370GQ via G03476LE | EdwardsLab |
Molecular Weight
| PermethylatedMW | 1462.74161815 | EdwardsLab |
|---|---|---|
| UnderivitizedMW | 1168.41296668 | EdwardsLab |
| UnderivitizedMW | 1168.4129662 | GlyTouCan |
Classification
| GlycanSubtype | O-linked core 1 | GlycoMotif:GGM.001006 |
|---|---|---|
| GlycanType | O-linked | GlycoMotif:GGM.001006 |
Monosaccharide Counts
| GalCount | 1 | EdwardsLab |
|---|---|---|
| GalNAcCount | 2 | EdwardsLab |
| HexCount | 1 | EdwardsLab |
| HexNAcCount | 2 | EdwardsLab |
| MonosaccharideCount | 5 | EdwardsLab |
| NeuAcCount | 2 | EdwardsLab |
| SiaCount | 2 | EdwardsLab |
| MonosaccharideCount | 5 | GlyTouCan |
Cross Reference
| GlyGen | G00063MO | EdwardsLab |
|---|---|---|
| GNOme | G00063MO | GNOme |
| GlyCosmos | G00063MO | GlyCosmos |
| Carbbank(CCSB) | 26749 | GlyTouCan |
| GLYCOSCIENCES.de | 6660, 25734 | GlyTouCan |
| GlyTouCan | G00063MO | GlyTouCan |
| GlycomeDB | 4701 | GlyTouCan |
| PubChem | CID91853411, SID252285826 | GlyTouCan |
Glycan Motif
| ClassMotif | GGM.001006 | GlycoMotif |
|---|---|---|
| Motif | GGM.000035 | GlycoMotif |
| StrictClassMotif | GGM.001006 | GlycoMotif |
| StrictMotif | GGM.000035 | GlycoMotif |
Subsumption
| Ancestor | G03476LE, G07293JT, G10057RC, G12520SZ, G27562JG, G31008GE, G60382VE, G99269VU | GNOme |
|---|---|---|
| BaseComposition | G10057RC | GNOme |
| Composition | G03476LE | GNOme |
| Level | Saccharide | GNOme |
| MissingScore | 0 | GNOme |
| SubsumedBy | G07293JT | GNOme |
| Topology | G31008GE | GNOme |
Glycan Structure
| Composition | false | EdwardsLab |
|---|---|---|
| FullyDetermined | true | EdwardsLab |
| HasMonosaccharide | Gal, GalNAc, Hex, HexNAc, NeuAc, Sia | EdwardsLab |
| HasRepeat | false | EdwardsLab |
| ReducingEnd | GalNAc, HexNAc | EdwardsLab |
| UndeterminedTopology | false | EdwardsLab |