G00247PL

From GlycanData
Jump to navigation Jump to search

Sequence

GlycoCT

RES 1b:x-dglc-HEX-1:5 2s:n-acetyl 3b:b-dglc-HEX-1:5 4s:n-acetyl 5b:b-dman-HEX-1:5 6b:a-dman-HEX-1:5 7b:b-dglc-HEX-1:5 8s:n-acetyl 9b:b-dgal-HEX-1:5 10b:b-dglc-HEX-1:5 11s:n-acetyl 12b:a-dman-HEX-1:5 13b:a-dman-HEX-1:5 14b:a-lgal-HEX-1:5|6:d LIN 1:1d(2+1)2n 2:1o(4+1)3d 3:3d(2+1)4n 4:3o(4+1)5d 5:5o(3+1)6d 6:6o(2+1)7d 7:7d(2+1)8n 8:7o(4+1)9d 9:5o(4+1)10d 10:10d(2+1)11n 11:5o(6+1)12d 12:12o(3+1)13d 13:1o(6+1)14d

GlyTouCan
GlycoWorkBench

redEnd--?D-?-D-Glcp,p((--2NAc)--4b1D-b-D-Glcp,p(--2NAc)--4b1D-b-D-Manp,p((--3a1D-a-D-Manp,p--2b1D-b-D-Glcp,p(--2NAc)--4b1D-b-D-Galp,p)--4b1D-b-D-Glcp,p--2NAc)--6a1D-a-D-Manp,p--3a1D-a-D-Manp,p)--6a1L-a-L-Fucp,p$MONO,perMe,Na,0,redEnd

EdwardsLab
IUPAC

beta-D-Galp-(1->4)-beta-D-GlcpNAc-(1->2)-alpha-D-Manp-(1->3)[beta-D-GlcpNAc-(1->4)][alpha-D-Manp-(1->3)-alpha-D-Manp-(1->6)]-beta-D-Manp-(1->4)-beta-D-GlcpNAc-(1->4)[alpha-L-Fucp-(1->6)]-?-D-GlcpNAc-(1->

EdwardsLab
IUPAC

beta-D-Galp-(1->4)-beta-D-GlcpNAc-(1->2)-alpha-D-Manp-(1->3)[beta-D-GlcpNAc-(1->4)][alpha-D-Manp-(1->3)-alpha-D-Manp-(1->6)]-beta-D-Manp-(1->4)-beta-D-GlcpNAc-(1->4)[alpha-L-Fucp-(1->6)]-?-D-GlcpNAc-(1->

GlyCosmos
WURCS

WURCS=2.0/6,10,9/[a2122h-1x_1-5_2*NCC/3=O][a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5][a2112h-1b_1-5][a1221m-1a_1-5]/1-2-3-4-2-5-2-4-4-6/a4-b1_a6-j1_b4-c1_c3-d1_c4-g1_c6-h1_d2-e1_e4-f1_h3-i1

GlyTouCan

Species

Rat Evidence Composition closure of G03802LT via G76605ZF EdwardsLab

Molecular Weight

PermethylatedMW 2221.13523366 EdwardsLab
UnderivitizedMW 1786.65008149 EdwardsLab
UnderivitizedMW 1786.6500807 GlyTouCan

Classification

GlycanSubtype N-linked hybrid GlycoMotif:GGM.001003
GlycanSubtype N-linked bisected GlycoMotif:GGM.001023
GlycanSubtype N-linked core-fucosylated GlycoMotif:GGM.001024
GlycanType N-linked GlycoMotif:GGM.001003

Monosaccharide Counts

FucCount 1 EdwardsLab
GalCount 1 EdwardsLab
GlcNAcCount 4 EdwardsLab
HexCount 5 EdwardsLab
HexNAcCount 4 EdwardsLab
ManCount 4 EdwardsLab
MonosaccharideCount 10 EdwardsLab
dHexCount 1 EdwardsLab
MonosaccharideCount 10 GlyTouCan

Cross Reference

GlyGen G00247PL EdwardsLab
GNOme G00247PL GNOme
GlyCosmos G00247PL GlyCosmos
GlyTouCan G00247PL GlyTouCan
GlycomeDB 39406 GlyTouCan
PubChem CID71297668, SID252279192 GlyTouCan

Glycan Motif

ClassMotif GGM.001001, GGM.001003, GGM.001023, GGM.001024, GGM.001027 GlycoMotif
Motif GGM.000001 GlycoMotif
StrictClassMotif GGM.001001, GGM.001003, GGM.001023, GGM.001024, GGM.001027 GlycoMotif
StrictMotif GGM.000001 GlycoMotif

Subsumption

Ancestor G23863VK, G49086NE, G73846SW, G76605ZF, G83555HU, G89152GT, G90659AW GNOme
BaseComposition G83555HU GNOme
Composition G76605ZF GNOme
Descendant G42477ZH GNOme
FullyDetermined G42477ZH GNOme
Level Saccharide GNOme
MissingScore 69 GNOme
SubsumedBy G49086NE GNOme
Subsumes G42477ZH GNOme
Topology G49086NE GNOme

Glycan Structure

Composition false EdwardsLab
FullyDetermined true EdwardsLab
HasMonosaccharide Fuc, Gal, GlcNAc, Hex, HexNAc, Man, dHex EdwardsLab
HasRepeat false EdwardsLab
ReducingEnd GlcNAc, HexNAc EdwardsLab
UndeterminedTopology false EdwardsLab