G00277SO

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Sequence

GlycoCT

RES 1b:x-dgal-HEX-1:5 2s:n-acetyl 3b:x-dglc-HEX-1:5 4s:n-acetyl 5b:x-dglc-HEX-1:5 6s:n-acetyl 7b:x-lgal-HEX-1:5|6:d 8b:x-dgal-HEX-1:5 9b:x-dgal-HEX-1:5 10b:x-lgal-HEX-1:5|6:d LIN 1:1d(2+1)2n 2:1o(-1+1)3d 3:3d(2+1)4n 4:3o(-1+1)5d 5:5d(2+1)6n 6:5o(-1+1)7d 7:5o(-1+1)8d 8:1o(-1+1)9d 9:9o(-1+1)10d

GlyTouCan
GlycoWorkBench

redEnd--?D-?-D-Galp,p((--2NAc)--??1D-?-D-Glcp,p(--2NAc)--??1D-?-D-Glcp,p((--2NAc)--??1L-?-L-Fucp,p)--??1D-?-D-Galp,p)--??1D-?-D-Galp,p--??1L-?-L-Fucp,p$MONO,perMe,Na,0,redEnd

EdwardsLab
IUPAC

?-D-Galp-(1->?)[?-L-Fucp-(1->?)]-?-D-GlcpNAc-(1->?)-?-D-GlcpNAc-(1->?)[?-L-Fucp-(1->?)-?-D-Galp-(1->?)]-?-D-GalpNAc-(1->

EdwardsLab
IUPAC

?-D-Galp-(1->?)[?-L-Fucp-(1->?)]-?-D-GlcpNAc-(1->?)-?-D-GlcpNAc-(1->?)[?-L-Fucp-(1->?)-?-D-Galp-(1->?)]-?-D-GalpNAc-(1->

GlyCosmos
WURCS

WURCS=2.0/4,7,6/[a2112h-1x_1-5_2*NCC/3=O][a2122h-1x_1-5_2*NCC/3=O][a1221m-1x_1-5][a2112h-1x_1-5]/1-2-2-3-4-4-3/a?-b1_a?-f1_b?-c1_c?-d1_c?-e1_f?-g1

GlyTouCan

Species

Human Evidence Composition closure of G00901NZ via G06194QO
Composition closure of G02032MW via G06194QO
Composition closure of G20372QO via G06194QO
Composition closure of G29418HB via G06194QO
Composition closure of G36404TW via G06194QO
Composition closure of G39326PP via G06194QO
Composition closure of G73323VU via G06194QO
Composition closure of G97840DJ via G06194QO
EdwardsLab
Rat Evidence Composition closure of G20372QO via G06194QO
Composition closure of G98007XA via G06194QO
EdwardsLab

Molecular Weight

PermethylatedMW 1537.79879873 EdwardsLab
UnderivitizedMW 1243.47014726 EdwardsLab
UnderivitizedMW 1243.4701467 GlyTouCan

Classification

GlycanSubtype O-linked core 2 GlycoMotif:GGM.001007
GlycanType O-linked GlycoMotif:GGM.001007

Monosaccharide Counts

FucCount 2 EdwardsLab
GalCount 2 EdwardsLab
GalNAcCount 1 EdwardsLab
GlcNAcCount 2 EdwardsLab
HexCount 2 EdwardsLab
HexNAcCount 3 EdwardsLab
MonosaccharideCount 7 EdwardsLab
dHexCount 2 EdwardsLab
MonosaccharideCount 7 GlyTouCan

Cross Reference

GlyGen G00277SO EdwardsLab
GNOme G00277SO GNOme
GlyCosmos G00277SO GlyCosmos
GlyTouCan G00277SO GlyTouCan

Glycan Motif

ClassMotif GGM.001005, GGM.001006, GGM.001007, GGM.001008, GGM.001009, GGM.001010, GGM.001015, GGM.001016 GlycoMotif
Motif GGM.000001, GGM.000005, GGM.000018, GGM.000020 GlycoMotif

Subsumption

Ancestor G06194QO, G61099GA, G88555AB GNOme
BaseComposition G61099GA GNOme
Composition G06194QO GNOme
Descendant G41552FO, G82054AK GNOme
FullyDetermined G41552FO GNOme
Level Topology GNOme
MissingScore 1025 GNOme
Saccharides G41552FO, G82054AK GNOme
SubsumedBy G06194QO GNOme
Subsumes G82054AK GNOme
Topology G00277SO GNOme

Glycan Structure

Composition false EdwardsLab
FullyDetermined false EdwardsLab
HasMonosaccharide Fuc, Gal, GalNAc, GlcNAc, Hex, HexNAc, dHex EdwardsLab
HasRepeat false EdwardsLab
ReducingEnd GalNAc, HexNAc EdwardsLab
UndeterminedTopology false EdwardsLab