G00279YF

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Sequence

GlycoCT

RES 1b:x-dglc-HEX-1:5 2s:n-acetyl 3b:b-dglc-HEX-1:5 4s:n-acetyl 5b:b-dman-HEX-1:5 6b:a-dman-HEX-1:5 7b:b-dglc-HEX-1:5 8s:n-acetyl 9b:b-dgal-HEX-1:5 10s:n-acetyl 11b:b-dglc-HEX-1:5 12s:n-acetyl 13b:a-dman-HEX-1:5 14b:b-dglc-HEX-1:5 15s:n-acetyl LIN 1:1d(2+1)2n 2:1o(4+1)3d 3:3d(2+1)4n 4:3o(4+1)5d 5:5o(3+1)6d 6:6o(2+1)7d 7:7d(2+1)8n 8:7o(4+1)9d 9:9d(2+1)10n 10:6o(4+1)11d 11:11d(2+1)12n 12:5o(6+1)13d 13:13o(2+1)14d 14:14d(2+1)15n

GlyTouCan
GlycoWorkBench

redEnd--?D-?-D-Glcp,p(--2NAc)--4b1D-b-D-Glcp,p(--2NAc)--4b1D-b-D-Manp,p(--3a1D-a-D-Manp,p(--2b1D-b-D-Glcp,p(--2NAc)--4b1D-b-D-Galp,p--2NAc)--4b1D-b-D-Glcp,p--2NAc)--6a1D-a-D-Manp,p--2b1D-b-D-Glcp,p--2NAc$MONO,perMe,Na,0,redEnd

EdwardsLab
IUPAC

beta-D-GalpNAc-(1->4)-beta-D-GlcpNAc-(1->2)[beta-D-GlcpNAc-(1->4)]-alpha-D-Manp-(1->3)[beta-D-GlcpNAc-(1->2)-alpha-D-Manp-(1->6)]-beta-D-Manp-(1->4)-beta-D-GlcpNAc-(1->4)-?-D-GlcpNAc-(1->

EdwardsLab
IUPAC

beta-D-GalpNAc-(1->4)-beta-D-GlcpNAc-(1->2)[beta-D-GlcpNAc-(1->4)]-alpha-D-Manp-(1->3)[beta-D-GlcpNAc-(1->2)-alpha-D-Manp-(1->6)]-beta-D-Manp-(1->4)-beta-D-GlcpNAc-(1->4)-?-D-GlcpNAc-(1->

GlyCosmos
WURCS

WURCS=2.0/5,9,8/[a2122h-1x_1-5_2*NCC/3=O][a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5][a2112h-1b_1-5_2*NCC/3=O]/1-2-3-4-2-5-2-4-2/a4-b1_b4-c1_c3-d1_c6-h1_d2-e1_d4-g1_e4-f1_h2-i1

GlyTouCan

Taxonomy

Taxonomy 9606 GlyTouCan:G00279YF

Species

Human Evidence GlyTouCan:G00279YF TaxID 9606
No N-linked Xyl and no NeuGc, Alt
EdwardsLab

Molecular Weight

PermethylatedMW 2129.09912286 EdwardsLab
UnderivitizedMW 1722.64527083 EdwardsLab
UnderivitizedMW 1722.6452701 GlyTouCan

Classification

GlycanSubtype N-linked complex GlycoMotif:GGM.001004
GlycanType N-linked GlycoMotif:GGM.001004

Monosaccharide Counts

GalNAcCount 1 EdwardsLab
GlcNAcCount 5 EdwardsLab
HexCount 3 EdwardsLab
HexNAcCount 6 EdwardsLab
ManCount 3 EdwardsLab
MonosaccharideCount 9 EdwardsLab
MonosaccharideCount 9 GlyTouCan

Cross Reference

GlyGen G00279YF EdwardsLab
GNOme G00279YF GNOme
GlyCosmos G00279YF GlyCosmos
CFG carbNlink_20273_D000 GlyTouCan
GlyTouCan G00279YF GlyTouCan
GlycomeDB 20511 GlyTouCan
KEGG G04991 GlyTouCan
PubChem CID91851031, SID252282987 GlyTouCan

Glycan Motif

ClassMotif GGM.001001, GGM.001004, GGM.001027 GlycoMotif
Motif GGM.000016 GlycoMotif
StrictClassMotif GGM.001001, GGM.001004, GGM.001027 GlycoMotif
StrictMotif GGM.000016 GlycoMotif

Subsumption

Ancestor G01998SG, G07024ZV, G09082RG, G14260UH, G15579SF, G21573FN, G35635NQ, G42734XB, G54884LT, G74068KQ, G80382WR, G83390KL, G83633GK GNOme
BaseComposition G83633GK GNOme
Composition G83390KL GNOme
Descendant G29434RB GNOme
FullyDetermined G29434RB GNOme
Level Saccharide GNOme
MissingScore 77 GNOme
SubsumedBy G09082RG, G21573FN, G54884LT GNOme
Subsumes G29434RB GNOme
Topology G09082RG GNOme

Glycan Structure

Composition false EdwardsLab
FullyDetermined true EdwardsLab
HasMonosaccharide GalNAc, GlcNAc, Hex, HexNAc, Man EdwardsLab
HasRepeat false EdwardsLab
ReducingEnd GlcNAc, HexNAc EdwardsLab
UndeterminedTopology false EdwardsLab