G00318AV

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Sequence

GlycoCT

RES 1b:x-dglc-HEX-1:5 2s:n-acetyl 3b:b-dglc-HEX-1:5 4s:n-acetyl 5b:b-dman-HEX-1:5 6b:a-dman-HEX-1:5 7b:x-dglc-HEX-1:5 8b:x-dgal-HEX-1:5 9b:x-dgro-dgal-NON-2:6|1:a|2:keto|3:d 10s:n-acetyl 11s:n-acetyl 12b:a-dman-HEX-1:5 13b:x-dglc-HEX-1:5 14b:x-dgal-HEX-1:5 15b:x-dgro-dgal-NON-2:6|1:a|2:keto|3:d 16s:n-acetyl 17s:n-acetyl 18b:a-lgal-HEX-1:5|6:d LIN 1:1d(2+1)2n 2:1o(4+1)3d 3:3d(2+1)4n 4:3o(4+1)5d 5:5o(3+1)6d 6:6o(-1+1)7d 7:7o(-1+1)8d 8:8o(-1+2)9d 9:9d(5+1)10n 10:7d(2+1)11n 11:5o(6+1)12d 12:12o(-1+1)13d 13:13o(-1+1)14d 14:14o(-1+2)15d 15:15d(5+1)16n 16:13d(2+1)17n 17:1o(6+1)18d

GlyTouCan
GlycoWorkBench

redEnd--?D-?-D-Glcp,p((--2NAc)--4b1D-b-D-Glcp,p(--2NAc)--4b1D-b-D-Manp,p(--3a1D-a-D-Manp,p--??1D-?-D-Glcp,p(--2NAc)--??1D-?-D-Galp,p--??2D-?-D-Neup,p--5NAc)--6a1D-a-D-Manp,p--??1D-?-D-Glcp,p(--2NAc)--??1D-?-D-Galp,p--??2D-?-D-Neup,p--5NAc)--6a1L-a-L-Fucp,p$MONO,perMe,Na,0,redEnd

EdwardsLab
IUPAC

?-D-Neup5Ac-(2->?)-?-D-Galp-(1->?)-?-D-GlcpNAc-(1->?)-alpha-D-Manp-(1->3)[?-D-Neup5Ac-(2->?)-?-D-Galp-(1->?)-?-D-GlcpNAc-(1->?)-alpha-D-Manp-(1->6)]-beta-D-Manp-(1->4)-beta-D-GlcpNAc-(1->4)[alpha-L-Fucp-(1->6)]-?-D-GlcpNAc-(1->

EdwardsLab
IUPAC

?-D-Neup5Ac-(2->?)-?-D-Galp-(1->?)-?-D-GlcpNAc-(1->?)-alpha-D-Manp-(1->3)[?-D-Neup5Ac-(2->?)-?-D-Galp-(1->?)-?-D-GlcpNAc-(1->?)-alpha-D-Manp-(1->6)]-beta-D-Manp-(1->4)-beta-D-GlcpNAc-(1->4)[alpha-L-Fucp-(1->6)]-?-D-GlcpNAc-(1->

GlyCosmos
WURCS

WURCS=2.0/7,12,11/[a2122h-1x_1-5_2*NCC/3=O][a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5][a2112h-1x_1-5][Aad21122h-2x_2-6_5*NCC/3=O][a1221m-1a_1-5]/1-2-3-4-1-5-6-4-1-5-6-7/a4-b1_a6-l1_b4-c1_c3-d1_c6-h1_d?-e1_e?-f1_f?-g2_h?-i1_i?-j1_j?-k2

GlyTouCan

Species

Human Evidence Subsumption of G04286YE
Subsumption of G08146BT
Subsumption of G08606CV
Subsumption of G17689DH
Subsumption of G30618VC
Subsumption of G34946TH
Subsumption of G35242IF
Subsumption of G44264DI
Subsumption of G49225WK
Subsumption of G56749GV
Subsumption of G59655SA
Subsumption of G69725KG
Subsumption of G72954XC
Subsumption of G86294KR
Subsumption of G86750HK
Subsumption of G86881ZW
Subsumption of G90889KG
Subsumption of G96921ZU
EdwardsLab
Mouse Evidence Subsumption of G17689DH
Subsumption of G49225WK
Subsumption of G56749GV
Subsumption of G59655SA
Subsumption of G69725KG
Subsumption of G72954XC
Subsumption of G81459MV
Subsumption of G90889KG
Subsumption of G96921ZU
EdwardsLab
Rat Evidence Subsumption of G17689DH
Subsumption of G35242IF
Subsumption of G56749GV
Subsumption of G72954XC
Subsumption of G86750HK
Subsumption of G86881ZW
Subsumption of G90889KG
Subsumption of G96921ZU
EdwardsLab
SARS Evidence Subsumption of G08146BT EdwardsLab

Molecular Weight

PermethylatedMW 2943.48256763 EdwardsLab
UnderivitizedMW 2368.84091476 EdwardsLab
UnderivitizedMW 2368.8409137 GlyTouCan

Classification

GlycanSubtype N-linked complex GlycoMotif:GGM.001004
GlycanSubtype N-linked core-fucosylated GlycoMotif:GGM.001024
GlycanType N-linked GlycoMotif:GGM.001004

Monosaccharide Counts

FucCount 1 EdwardsLab
GalCount 2 EdwardsLab
GlcNAcCount 4 EdwardsLab
HexCount 5 EdwardsLab
HexNAcCount 4 EdwardsLab
ManCount 3 EdwardsLab
MonosaccharideCount 12 EdwardsLab
NeuAcCount 2 EdwardsLab
SiaCount 2 EdwardsLab
dHexCount 1 EdwardsLab
MonosaccharideCount 12 GlyTouCan

Cross Reference

GlyGen G00318AV EdwardsLab
GNOme G00318AV GNOme
GlyCosmos G00318AV GlyCosmos
GlyTouCan G00318AV GlyTouCan

Glycan Motif

ClassMotif GGM.001001, GGM.001004, GGM.001024, GGM.001027 GlycoMotif
Motif GGM.000001, GGM.000005, GGM.000034 GlycoMotif
StrictClassMotif GGM.001001, GGM.001024, GGM.001027 GlycoMotif

Subsumption

Ancestor G03707EH, G08835ES, G17664QO, G22310AV, G25570MS, G33052EK, G36220ML, G37260VJ, G40177UP, G42039FI, G45395BF, G50591OC, G53916LT, G64824NL, G69616RY, G78779MC, G83385WA, G88374WZ GNOme
BaseComposition G42039FI GNOme
Composition G83385WA GNOme
Descendant G01726PL, G04286YE, G07920ZX, G08146BT, G08606CV, G13346MU, G14899VS, G17689DH, G21513QX, G22747ZM, G26264SQ, G29255IL, G30618VC, G34946TH, G35242IF, G40353FS, G44264DI, G46936YB, G49225WK, G56749GV, G59655SA, G64501OO, G69725KG, G70818WE, G72954XC, G81459MV, G86294KR, G86750HK, G86881ZW, G90889KG, G91729DG, G96671XB, G96921ZU, G98537XO GNOme
FullyDetermined G07920ZX, G17689DH, G21513QX, G26264SQ, G56749GV, G59655SA, G91729DG, G96671XB, G96921ZU, G98537XO GNOme
Level Saccharide GNOme
MissingScore 582 GNOme
SubsumedBy G37260VJ GNOme
Subsumes G08146BT, G22747ZM GNOme
Topology G69616RY GNOme

Glycan Structure

Composition false EdwardsLab
FullyDetermined false EdwardsLab
HasMonosaccharide Fuc, Gal, GlcNAc, Hex, HexNAc, Man, NeuAc, Sia, dHex EdwardsLab
HasRepeat false EdwardsLab
ReducingEnd GlcNAc, HexNAc EdwardsLab
UndeterminedTopology false EdwardsLab