G00328CG

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Sequence

GlycoCT

RES 1b:x-dglc-HEX-1:5 2s:n-acetyl 3b:b-dglc-HEX-1:5 4s:n-acetyl 5b:b-dman-HEX-1:5 6b:a-dman-HEX-1:5 7b:x-dglc-HEX-1:5 8s:n-acetyl 9b:b-dgal-HEX-1:5 10b:a-dman-HEX-1:5 11b:x-dglc-HEX-1:5 12s:n-acetyl 13b:b-dgal-HEX-1:5 LIN 1:1d(2+1)2n 2:1o(4+1)3d 3:3d(2+1)4n 4:3o(4+1)5d 5:5o(3+1)6d 6:6o(-1+1)7d 7:7d(2+1)8n 8:7o(4+1)9d 9:5o(6+1)10d 10:10o(-1+1)11d 11:11d(2+1)12n 12:11o(4+1)13d UND UND1:100.0:100.0 ParentIDs:1|3|5|6|7|9|10|11|13 SubtreeLinkageID1:o(-1+2)d RES 14b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 15s:n-acetyl LIN 13:14d(5+1)15n UND2:100.0:100.0 ParentIDs:1|3|5|6|7|9|10|11|13 SubtreeLinkageID1:o(-1+2)d RES 16b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 17s:n-acetyl LIN 14:16d(5+1)17n UND3:100.0:100.0 ParentIDs:1|3|5|6|7|9|10|11|13 SubtreeLinkageID1:o(-1+2)d RES 18b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 19s:n-acetyl LIN 15:18d(5+1)19n

GlyTouCan
GlycoWorkBench

redEnd--?D-?-D-Glcp,p(--2NAc)--4b1D-b-D-Glcp,p(--2NAc)--4b1D-b-D-Manp,p(--3a1D-a-D-Manp,p--??1D-?-D-Glcp,p(--2NAc)--4b1D-b-D-Galp,p)--6a1D-a-D-Manp,p--??1D-?-D-Glcp,p(--2NAc)--4b1D-b-D-Galp,p}((--?a?D-a-D-Neup,p--5NAc)--?a?D-a-D-Neup,p--5NAc)--?a?D-a-D-Neup,p--5NAc$MONO,perMe,Na,0,redEnd

EdwardsLab
WURCS

WURCS=2.0/6,12,11/[a2122h-1x_1-5_2*NCC/3=O][a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5][a2112h-1b_1-5][Aad21122h-2a_2-6_5*NCC/3=O]/1-2-3-4-1-5-4-1-5-6-6-6/a4-b1_b4-c1_c3-d1_c6-g1_e4-f1_h4-i1_d?-e1_g?-h1_j2-a?|b?|c?|d?|e?|f?|g?|h?|i?}_k2-a?|b?|c?|d?|e?|f?|g?|h?|i?}_l2-a?|b?|c?|d?|e?|f?|g?|h?|i?}

GlyTouCan

Species

Mouse Evidence Composition closure of G72769FF via G88057TN EdwardsLab
Rat Evidence Composition closure of G00320ZP via G88057TN
Composition closure of G08624KO via G88057TN
Composition closure of G29130SY via G88057TN
Composition closure of G56095ZZ via G88057TN
Composition closure of G79520GQ via G88057TN
EdwardsLab

Molecular Weight

PermethylatedMW 3130.56702561 EdwardsLab
UnderivitizedMW 2513.87842253 EdwardsLab
UnderivitizedMW 2513.8784214 GlyTouCan

Classification

GlycanSubtype N-linked complex GlycoMotif:GGM.001004
GlycanType N-linked GlycoMotif:GGM.001004

Monosaccharide Counts

GalCount 2 EdwardsLab
GlcNAcCount 4 EdwardsLab
HexCount 5 EdwardsLab
HexNAcCount 4 EdwardsLab
ManCount 3 EdwardsLab
MonosaccharideCount 12 EdwardsLab
NeuAcCount 3 EdwardsLab
SiaCount 3 EdwardsLab
MonosaccharideCount 12 GlyTouCan

Cross Reference

GlyGen G00328CG EdwardsLab
GNOme G00328CG GNOme
GlyCosmos G00328CG GlyCosmos
GlyTouCan G00328CG GlyTouCan
GlycomeDB 40690 GlyTouCan

Glycan Motif

ClassMotif GGM.001001, GGM.001004, GGM.001027 GlycoMotif
Motif GGM.000001, GGM.000034 GlycoMotif
StrictClassMotif GGM.001001, GGM.001027 GlycoMotif

Subsumption

Ancestor G13710XN, G28916LJ, G67031OU, G84044GC, G88057TN GNOme
BaseComposition G84044GC GNOme
Composition G88057TN GNOme
Descendant G99518NJ GNOme
Level Saccharide GNOme
MissingScore 987 GNOme
SubsumedBy G13710XN GNOme
Subsumes G99518NJ GNOme
Topology G13710XN GNOme

Glycan Structure

Composition false EdwardsLab
FullyDetermined false EdwardsLab
HasMonosaccharide Gal, GlcNAc, Hex, HexNAc, Man, NeuAc, Sia EdwardsLab
HasRepeat false EdwardsLab
ReducingEnd GlcNAc, HexNAc EdwardsLab
UndeterminedTopology true EdwardsLab