G00383YF

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Sequence

GlycoCT

RES 1b:x-dglc-HEX-x:x 2s:n-acetyl 3b:b-dglc-HEX-1:5 4s:n-acetyl 5b:b-dman-HEX-1:5 6b:a-dman-HEX-1:5 7b:b-dglc-HEX-1:5 8s:n-acetyl 9b:b-dgal-HEX-1:5 10b:b-dglc-HEX-1:5 11s:n-acetyl 12b:b-dgal-HEX-1:5 13b:b-dglc-HEX-1:5 14s:n-acetyl 15b:a-dman-HEX-1:5 16b:b-dglc-HEX-1:5 17s:n-acetyl LIN 1:1d(2+1)2n 2:1o(4+1)3d 3:3d(2+1)4n 4:3o(4+1)5d 5:5o(3+1)6d 6:6o(2+1)7d 7:7d(2+1)8n 8:7o(4+1)9d 9:6o(4+1)10d 10:10d(2+1)11n 11:10o(4+1)12d 12:5o(4+1)13d 13:13d(2+1)14n 14:5o(6+1)15d 15:15o(2+1)16d 16:16d(2+1)17n

GlyTouCan
GlycoWorkBench

redEnd--?D-?-D-Glc(--2NAc)--4b1D-b-D-Glcp,p(--2NAc)--4b1D-b-D-Manp,p((--3a1D-a-D-Manp,p(--2b1D-b-D-Glcp,p(--2NAc)--4b1D-b-D-Galp,p)--4b1D-b-D-Glcp,p(--2NAc)--4b1D-b-D-Galp,p)--4b1D-b-D-Glcp,p--2NAc)--6a1D-a-D-Manp,p--2b1D-b-D-Glcp,p--2NAc$MONO,perMe,Na,0,redEnd

EdwardsLab
IUPAC

beta-D-Galp-(1->4)-beta-D-GlcpNAc-(1->2)[beta-D-Galp-(1->4)-beta-D-GlcpNAc-(1->4)]-alpha-D-Manp-(1->3)[beta-D-GlcpNAc-(1->4)][beta-D-GlcpNAc-(1->2)-alpha-D-Manp-(1->6)]-beta-D-Manp-(1->4)-beta-D-GlcpNAc-(1->4)-?-D-GlcNAc

EdwardsLab
IUPAC

beta-D-Galp-(1->4)-beta-D-GlcpNAc-(1->2)[beta-D-Galp-(1->4)-beta-D-GlcpNAc-(1->4)]-alpha-D-Manp-(1->3)[beta-D-GlcpNAc-(1->4)][beta-D-GlcpNAc-(1->2)-alpha-D-Manp-(1->6)]-beta-D-Manp-(1->4)-beta-D-GlcpNAc-(1->4)-D-GlcNAc

GlyCosmos
WURCS

WURCS=2.0/5,11,10/[u2122h_2*NCC/3=O][a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5][a2112h-1b_1-5]/1-2-3-4-2-5-2-5-2-4-2/a4-b1_b4-c1_c3-d1_c4-i1_c6-j1_d2-e1_d4-g1_e4-f1_g4-h1_j2-k1

GlyTouCan

Taxonomy

Taxonomy 9103 GlyTouCan:G00383YF

Species

Human Evidence Composition closure of G75051CY via G19504QQ EdwardsLab
Mouse Evidence Composition closure of G36053YX via G19504QQ
Composition closure of G99503MW via G19504QQ
EdwardsLab
Rat Evidence Subsumption of G84260SO EdwardsLab

Molecular Weight

PermethylatedMW 2537.29867028 EdwardsLab
UnderivitizedMW 2046.75091783 EdwardsLab
UnderivitizedMW 2046.7509169 GlyTouCan

Classification

GlycanSubtype N-linked complex GlycoMotif:GGM.001004
GlycanSubtype N-linked bisected GlycoMotif:GGM.001023
GlycanType N-linked GlycoMotif:GGM.001004

Monosaccharide Counts

GalCount 2 EdwardsLab
GlcNAcCount 6 EdwardsLab
HexCount 5 EdwardsLab
HexNAcCount 6 EdwardsLab
ManCount 3 EdwardsLab
MonosaccharideCount 11 EdwardsLab
MonosaccharideCount 11 GlyTouCan

Cross Reference

GlyGen G00383YF EdwardsLab
GNOme G00383YF GNOme
GlyCosmos G00383YF GlyCosmos
Carbbank(CCSB) 4975 GlyTouCan
GLYCOSCIENCES.de 7695 GlyTouCan
GlyTouCan G00383YF GlyTouCan
GlycomeDB 5375 GlyTouCan

Glycan Motif

ClassMotif GGM.001001, GGM.001004, GGM.001023, GGM.001027 GlycoMotif
Motif GGM.000001 GlycoMotif
StrictClassMotif GGM.001001, GGM.001004, GGM.001023 GlycoMotif
StrictMotif GGM.000001 GlycoMotif

Subsumption

Ancestor G06302GP, G19504QQ, G43769HG GNOme
BaseComposition G43769HG GNOme
Composition G19504QQ GNOme
Descendant G74574VX, G84260SO GNOme
FullyDetermined G74574VX GNOme
Level Saccharide GNOme
MissingScore 127 GNOme
SubsumedBy G06302GP GNOme
Subsumes G84260SO GNOme
Topology G06302GP GNOme

Glycan Structure

Composition false EdwardsLab
FullyDetermined true EdwardsLab
HasMonosaccharide Gal, GlcNAc, Hex, HexNAc, Man EdwardsLab
HasRepeat false EdwardsLab
ReducingEnd GlcNAc, HexNAc EdwardsLab
UndeterminedTopology false EdwardsLab