G00395TQ

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Sequence

GLYCAM-IUPAC

DManpa1-6DManpb1-4DGlcpNAcb1-4[LFucpa1-6]DGlcpNAcb1-OH

EdwardsLab
GlycoCT

RES 1b:b-dglc-HEX-1:5 2s:n-acetyl 3b:b-dglc-HEX-1:5 4s:n-acetyl 5b:b-dman-HEX-1:5 6b:a-dman-HEX-1:5 7b:a-lgal-HEX-1:5|6:d LIN 1:1d(2+1)2n 2:1o(4+1)3d 3:3d(2+1)4n 4:3o(4+1)5d 5:5o(6+1)6d 6:1o(6+1)7d

GlyTouCan
GlycoWorkBench

redEnd--?b?D-b-D-Glcp,p((--2NAc)--4b1D-b-D-Glcp,p(--2NAc)--4b1D-b-D-Manp,p--6a1D-a-D-Manp,p)--6a1L-a-L-Fucp,p$MONO,perMe,Na,0,redEnd

EdwardsLab
IUPAC

alpha-D-Manp-(1->6)-beta-D-Manp-(1->4)-beta-D-GlcpNAc-(1->4)[alpha-L-Fucp-(1->6)]-beta-D-GlcpNAc-(1->

EdwardsLab
IUPAC

alpha-D-Manp-(1->6)-beta-D-Manp-(1->4)-beta-D-GlcpNAc-(1->4)[alpha-L-Fucp-(1->6)]-beta-D-GlcpNAc-(1->

GlyCosmos
WURCS

WURCS=2.0/4,5,4/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5][a1221m-1a_1-5]/1-1-2-3-4/a4-b1_a6-e1_b4-c1_c6-d1

GlyTouCan

Taxonomy

Taxonomy 7227, 9606, 10090, 10116 GlyConnectStructure:1879
Taxonomy 4615, 9606 GlyTouCan:G00395TQ
Taxonomy 9606 UniCarbKB:2553

Species

FruitFly Evidence GlyConnectStructure:1879 TaxID 7227 EdwardsLab
Human Evidence GlyConnectStructure:1879 TaxID 9606
GlyTouCan:G00395TQ TaxID 9606
No N-linked Xyl and no NeuGc, Alt
UniCarbKB:2553 TaxID 9606
EdwardsLab
Mouse Evidence GlyConnectStructure:1879 TaxID 10090
No N-linked Xyl and no Alt
EdwardsLab
Rat Evidence GlyConnectStructure:1879 TaxID 10116
No N-linked Xyl and no Alt
EdwardsLab

Molecular Weight

PermethylatedMW 1118.5832669 EdwardsLab
UnderivitizedMW 894.33286578 EdwardsLab
UnderivitizedMW 894.33286538 GlyTouCan

Monosaccharide Counts

FucCount 1 EdwardsLab
GlcNAcCount 2 EdwardsLab
HexCount 2 EdwardsLab
HexNAcCount 2 EdwardsLab
ManCount 2 EdwardsLab
MonosaccharideCount 5 EdwardsLab
dHexCount 1 EdwardsLab
MonosaccharideCount 5 GlyTouCan

Cross Reference

GlyGen G00395TQ EdwardsLab
GNOme G00395TQ GNOme
GlyCosmos G00395TQ GlyCosmos
Carbbank(CCSB) 806, 807, 808, 809, 4252, 9182, 9348, 10934, 11674, 12779, 13306, 15935, 32847 GlyTouCan
GLYCOSCIENCES.de 232, 22945 GlyTouCan
GlyConnectStructure 1879 GlyTouCan
GlyTouCan G00395TQ GlyTouCan
GlycomeDB 180 GlyTouCan
KEGG G10653 GlyTouCan
PDB 1ykb, 2j1g, 2j3f, 2j3g, 2q86, 3dgc, 3t8x, 3zs0 GlyTouCan
PubChem CID91850249, SID252282053 GlyTouCan
UniCarbKB 2553 UniCarbKB

Publications

Publication 2110822, 7947762, 8344278, 8358150, 8810905, 9334252, 11180632 UniCarbKB:2553

Subsumption

Ancestor G12641NB, G19483CU, G29273GU, G31685JQ, G32072NY, G35528XC, G47829CW, G50346FN, G57807UI, G58507TC, G71784JC, G81807BK, G82986KC, G87787DE, G90765IR, G93579XB, G96536XO, G98398TH GNOme
BaseComposition G93579XB GNOme
Composition G12641NB GNOme
Level Saccharide GNOme
MissingScore 0 GNOme
SubsumedBy G35528XC, G50346FN GNOme
Topology G19483CU GNOme

Glycan Structure

Composition false EdwardsLab
FullyDetermined true EdwardsLab
HasMonosaccharide Fuc, GlcNAc, Hex, HexNAc, Man, dHex EdwardsLab
HasRepeat false EdwardsLab
ReducingEnd GlcNAc, HexNAc EdwardsLab
UndeterminedTopology false EdwardsLab