G00396IE

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Sequence

GlycoCT

RES 1b:x-dglc-HEX-1:5 2s:n-acetyl 3b:b-dglc-HEX-1:5 4s:n-acetyl 5b:b-dman-HEX-1:5 6b:a-dman-HEX-1:5 7b:b-dglc-HEX-1:5 8s:n-acetyl 9b:b-dgal-HEX-1:5 10b:a-dman-HEX-1:5 11b:b-dglc-HEX-1:5 12s:n-acetyl 13b:b-dgal-HEX-1:5 14b:a-lgal-HEX-1:5|6:d LIN 1:1d(2+1)2n 2:1o(4+1)3d 3:3d(2+1)4n 4:3o(4+1)5d 5:5o(3+1)6d 6:6o(-1+1)7d 7:7d(2+1)8n 8:7o(4+1)9d 9:5o(6+1)10d 10:10o(6+1)11d 11:11d(2+1)12n 12:11o(4+1)13d 13:1o(6+1)14d

GlyTouCan
GlycoWorkBench

redEnd--?D-?-D-Glcp,p((--2NAc)--4b1D-b-D-Glcp,p(--2NAc)--4b1D-b-D-Manp,p(--3a1D-a-D-Manp,p--?b1D-b-D-Glcp,p(--2NAc)--4b1D-b-D-Galp,p)--6a1D-a-D-Manp,p--6b1D-b-D-Glcp,p(--2NAc)--4b1D-b-D-Galp,p)--6a1L-a-L-Fucp,p$MONO,perMe,Na,0,redEnd

EdwardsLab
IUPAC

beta-D-Galp-(1->4)-beta-D-GlcpNAc-(1->?)-alpha-D-Manp-(1->3)[beta-D-Galp-(1->4)-beta-D-GlcpNAc-(1->6)-alpha-D-Manp-(1->6)]-beta-D-Manp-(1->4)-beta-D-GlcpNAc-(1->4)[alpha-L-Fucp-(1->6)]-?-D-GlcpNAc-(1->

EdwardsLab
IUPAC

beta-D-Galp-(1->4)-beta-D-GlcpNAc-(1->?)-alpha-D-Manp-(1->3)[beta-D-Galp-(1->4)-beta-D-GlcpNAc-(1->6)-alpha-D-Manp-(1->6)]-beta-D-Manp-(1->4)-beta-D-GlcpNAc-(1->4)[alpha-L-Fucp-(1->6)]-?-D-GlcpNAc-(1->

GlyCosmos
WURCS

WURCS=2.0/6,10,9/[a2122h-1x_1-5_2*NCC/3=O][a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5][a2112h-1b_1-5][a1221m-1a_1-5]/1-2-3-4-2-5-4-2-5-6/a4-b1_a6-j1_b4-c1_c3-d1_c6-g1_e4-f1_g6-h1_h4-i1_d?-e1

GlyTouCan

Species

Human Evidence Subsumption of G06534UH
Subsumption of G34595KJ
Subsumption of G42264OV
EdwardsLab
Mouse Evidence Composition closure of G01338AS via G01924ZE
Composition closure of G10995NB via G01924ZE
Composition closure of G47866EC via G01924ZE
Composition closure of G57818FI via G01924ZE
Composition closure of G69461KL via G01924ZE
Composition closure of G76679QH via G01924ZE
Composition closure of G77166ST via G01924ZE
Composition closure of G78059CC via G01924ZE
Composition closure of G86495BQ via G01924ZE
Composition closure of G91591MO via G01924ZE
EdwardsLab
Rat Evidence Composition closure of G06069CG via G01924ZE
Composition closure of G09394JN via G01924ZE
Composition closure of G09921WG via G01924ZE
Composition closure of G33070IY via G01924ZE
Composition closure of G50474FI via G01924ZE
Composition closure of G69461KL via G01924ZE
Composition closure of G70757BE via G01924ZE
Composition closure of G78059CC via G01924ZE
Composition closure of G80637VS via G01924ZE
Composition closure of G82420SH via G01924ZE
EdwardsLab
SARS Evidence Composition closure of G57818FI via G01924ZE EdwardsLab

Molecular Weight

PermethylatedMW 2221.13523366 EdwardsLab
UnderivitizedMW 1786.65008149 EdwardsLab
UnderivitizedMW 1786.6500807 GlyTouCan

Classification

GlycanSubtype N-linked core-fucosylated GlycoMotif:GGM.001024
GlycanType N-linked GlycoMotif:GGM.001024

Monosaccharide Counts

FucCount 1 EdwardsLab
GalCount 2 EdwardsLab
GlcNAcCount 4 EdwardsLab
HexCount 5 EdwardsLab
HexNAcCount 4 EdwardsLab
ManCount 3 EdwardsLab
MonosaccharideCount 10 EdwardsLab
dHexCount 1 EdwardsLab
MonosaccharideCount 10 GlyTouCan

Cross Reference

GlyGen G00396IE EdwardsLab
GNOme G00396IE GNOme
GlyCosmos G00396IE GlyCosmos
GlyTouCan G00396IE GlyTouCan
GlycomeDB 39486 GlyTouCan

Glycan Motif

ClassMotif GGM.001001, GGM.001024, GGM.001027 GlycoMotif
Motif GGM.000001 GlycoMotif
StrictClassMotif GGM.001001, GGM.001024, GGM.001027 GlycoMotif
StrictMotif GGM.000001 GlycoMotif

Subsumption

Ancestor G01924ZE, G10567NI, G18808AB, G23863VK, G24763HX, G27658AJ, G28176UJ, G35174SC, G41212YD, G41214PX, G52069SB, G60689VV, G66072SG, G72093LK, G73846SW, G77688PF, G83555HU, G89080KU, G89152GT, G90659AW, G94873VZ, G96779TZ GNOme
BaseComposition G83555HU GNOme
Composition G01924ZE GNOme
Descendant G06534UH, G14311HQ, G34595KJ, G42264OV, G57345HS, G92117KA GNOme
FullyDetermined G14311HQ, G57345HS GNOme
Level Saccharide GNOme
MissingScore 106 GNOme
SubsumedBy G28176UJ GNOme
Subsumes G06534UH, G42264OV GNOme
Topology G27658AJ GNOme

Glycan Structure

Composition false EdwardsLab
FullyDetermined false EdwardsLab
HasMonosaccharide Fuc, Gal, GlcNAc, Hex, HexNAc, Man, dHex EdwardsLab
HasRepeat false EdwardsLab
ReducingEnd GlcNAc, HexNAc EdwardsLab
UndeterminedTopology false EdwardsLab