G00470UO

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Sequence

GlycoCT

RES 1b:x-dglc-HEX-x:x 2s:n-acetyl 3b:b-dglc-HEX-1:5 4s:n-acetyl 5b:b-dman-HEX-1:5 6b:a-dman-HEX-1:5 7b:b-dglc-HEX-1:5 8s:n-acetyl 9b:b-dgal-HEX-1:5 10s:n-acetyl 11b:b-dglc-HEX-1:5 12s:n-acetyl 13b:a-dman-HEX-1:5 14b:b-dglc-HEX-1:5 15s:n-acetyl 16b:b-dglc-HEX-1:5 17s:n-acetyl 18b:a-lgal-HEX-1:5|6:d LIN 1:1d(2+1)2n 2:1o(4+1)3d 3:3d(2+1)4n 4:3o(4+1)5d 5:5o(3+1)6d 6:6o(2+1)7d 7:7d(2+1)8n 8:7o(4+1)9d 9:9d(2+1)10n 10:6o(4+1)11d 11:11d(2+1)12n 12:5o(6+1)13d 13:13o(2+1)14d 14:14d(2+1)15n 15:13o(6+1)16d 16:16d(2+1)17n 17:1o(6+1)18d

GlyTouCan
GlycoWorkBench

redEnd--?D-?-D-Glc((--2NAc)--4b1D-b-D-Glcp,p(--2NAc)--4b1D-b-D-Manp,p(--3a1D-a-D-Manp,p(--2b1D-b-D-Glcp,p(--2NAc)--4b1D-b-D-Galp,p--2NAc)--4b1D-b-D-Glcp,p--2NAc)--6a1D-a-D-Manp,p(--2b1D-b-D-Glcp,p--2NAc)--6b1D-b-D-Glcp,p--2NAc)--6a1L-a-L-Fucp,p$MONO,perMe,Na,0,redEnd

EdwardsLab
IUPAC

beta-D-GalpNAc-(1->4)-beta-D-GlcpNAc-(1->2)[beta-D-GlcpNAc-(1->4)]-alpha-D-Manp-(1->3)[beta-D-GlcpNAc-(1->2)[beta-D-GlcpNAc-(1->6)]-alpha-D-Manp-(1->6)]-beta-D-Manp-(1->4)-beta-D-GlcpNAc-(1->4)[alpha-L-Fucp-(1->6)]-?-D-GlcNAc

EdwardsLab
IUPAC

beta-D-GalpNAc-(1->4)-beta-D-GlcpNAc-(1->2)[beta-D-GlcpNAc-(1->4)]-alpha-D-Manp-(1->3)[beta-D-GlcpNAc-(1->2)[beta-D-GlcpNAc-(1->6)]-alpha-D-Manp-(1->6)]-beta-D-Manp-(1->4)-beta-D-GlcpNAc-(1->4)[alpha-L-Fucp-(1->6)]-D-GlcNAc

GlyCosmos
WURCS

WURCS=2.0/6,11,10/[u2122h_2*NCC/3=O][a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5][a2112h-1b_1-5_2*NCC/3=O][a1221m-1a_1-5]/1-2-3-4-2-5-2-4-2-2-6/a4-b1_a6-k1_b4-c1_c3-d1_c6-h1_d2-e1_d4-g1_e4-f1_h2-i1_h6-j1

GlyTouCan

Taxonomy

Taxonomy 9606 GlyTouCan:G00470UO

Species

Human Evidence GlyTouCan:G00470UO TaxID 9606
No N-linked Xyl and no NeuGc, Alt
EdwardsLab

Molecular Weight

PermethylatedMW 2548.31465468 EdwardsLab
UnderivitizedMW 2071.78255231 EdwardsLab
UnderivitizedMW 2071.7825514 GlyTouCan

Classification

GlycanSubtype N-linked complex GlycoMotif:GGM.001004
GlycanSubtype N-linked core-fucosylated GlycoMotif:GGM.001024
GlycanType N-linked GlycoMotif:GGM.001004

Monosaccharide Counts

FucCount 1 EdwardsLab
GalNAcCount 1 EdwardsLab
GlcNAcCount 6 EdwardsLab
HexCount 3 EdwardsLab
HexNAcCount 7 EdwardsLab
ManCount 3 EdwardsLab
MonosaccharideCount 11 EdwardsLab
dHexCount 1 EdwardsLab
MonosaccharideCount 11 GlyTouCan

Cross Reference

GlyGen G00470UO EdwardsLab
GNOme G00470UO GNOme
GlyCosmos G00470UO GlyCosmos
Carbbank(CCSB) 28366 GlyTouCan
GLYCOSCIENCES.de 1817 GlyTouCan
GlyTouCan G00470UO GlyTouCan
GlycomeDB 1503 GlyTouCan

Glycan Motif

ClassMotif GGM.001001, GGM.001004, GGM.001024, GGM.001027 GlycoMotif
Motif GGM.000016 GlycoMotif
StrictClassMotif GGM.001001, GGM.001004 GlycoMotif
StrictMotif GGM.000016 GlycoMotif

Subsumption

Ancestor G11275FH, G24528MX, G67367OT, G91034CB, G97684YT GNOme
BaseComposition G67367OT GNOme
Composition G97684YT GNOme
Descendant G12061IK, G33522ME GNOme
FullyDetermined G12061IK GNOme
Level Saccharide GNOme
MissingScore 127 GNOme
SubsumedBy G11275FH GNOme
Subsumes G33522ME GNOme
Topology G11275FH GNOme

Glycan Structure

Composition false EdwardsLab
FullyDetermined true EdwardsLab
HasMonosaccharide Fuc, GalNAc, GlcNAc, Hex, HexNAc, Man, dHex EdwardsLab
HasRepeat false EdwardsLab
ReducingEnd GlcNAc, HexNAc EdwardsLab
UndeterminedTopology false EdwardsLab