G00480KJ

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Sequence

GLYCAM-IUPAC

DNeup5Aca2-6DGalpb1-4DGlcpNAcb1-2DManpa1-3[DGalpb1-4DGlcpNAcb1-2DManpa1-6]DManpb1-4DGlcpNAcb1-4[DFucpa1-6]DGlcpNAca1-OH

EdwardsLab
GlycoCT

RES 1b:a-dglc-HEX-1:5 2s:n-acetyl 3b:b-dglc-HEX-1:5 4s:n-acetyl 5b:b-dman-HEX-1:5 6b:a-dman-HEX-1:5 7b:b-dglc-HEX-1:5 8s:n-acetyl 9b:b-dgal-HEX-1:5 10b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 11s:n-acetyl 12b:a-dman-HEX-1:5 13b:b-dglc-HEX-1:5 14s:n-acetyl 15b:b-dgal-HEX-1:5 16b:a-dgal-HEX-1:5|6:d LIN 1:1d(2+1)2n 2:1o(4+1)3d 3:3d(2+1)4n 4:3o(4+1)5d 5:5o(3+1)6d 6:6o(2+1)7d 7:7d(2+1)8n 8:7o(4+1)9d 9:9o(6+2)10d 10:10d(5+1)11n 11:5o(6+1)12d 12:12o(2+1)13d 13:13d(2+1)14n 14:13o(4+1)15d 15:1o(6+1)16d

GlyTouCan
GlycoWorkBench

redEnd--?a?D-a-D-Glcp,p((--2NAc)--4b1D-b-D-Glcp,p(--2NAc)--4b1D-b-D-Manp,p(--3a1D-a-D-Manp,p--2b1D-b-D-Glcp,p(--2NAc)--4b1D-b-D-Galp,p--6a2D-a-D-Neup,p--5NAc)--6a1D-a-D-Manp,p--2b1D-b-D-Glcp,p(--2NAc)--4b1D-b-D-Galp,p)--6a1D-a-D-Fucp,p$MONO,perMe,Na,0,redEnd

EdwardsLab
IUPAC

alpha-D-Neup5Ac-(2->6)-beta-D-Galp-(1->4)-beta-D-GlcpNAc-(1->2)-alpha-D-Manp-(1->3)[beta-D-Galp-(1->4)-beta-D-GlcpNAc-(1->2)-alpha-D-Manp-(1->6)]-beta-D-Manp-(1->4)-beta-D-GlcpNAc-(1->4)[alpha-D-Fucp-(1->6)]-alpha-D-GlcpNAc-(1->

EdwardsLab
IUPAC

alpha-D-Neup5Ac-(2->6)-beta-D-Galp-(1->4)-beta-D-GlcpNAc-(1->2)-alpha-D-Manp-(1->3)[beta-D-Galp-(1->4)-beta-D-GlcpNAc-(1->2)-alpha-D-Manp-(1->6)]-beta-D-Manp-(1->4)-beta-D-GlcpNAc-(1->4)[alpha-D-Fucp-(1->6)]-alpha-D-GlcpNAc-(1->

GlyCosmos
WURCS

WURCS=2.0/7,11,10/[a2122h-1a_1-5_2*NCC/3=O][a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5][a2112h-1b_1-5][Aad21122h-2a_2-6_5*NCC/3=O][a2112m-1a_1-5]/1-2-3-4-2-5-6-4-2-5-7/a4-b1_a6-k1_b4-c1_c3-d1_c6-h1_d2-e1_e4-f1_f6-g2_h2-i1_i4-j1

GlyTouCan

Species

Mouse Evidence Composition closure of G84882JT via G54382UL EdwardsLab

Molecular Weight

PermethylatedMW 2582.30890064 EdwardsLab
UnderivitizedMW 2077.74549812 EdwardsLab
UnderivitizedMW 2077.7454972 GlyTouCan

Classification

GlycanSubtype N-linked complex GlycoMotif:GGM.001004
GlycanType N-linked GlycoMotif:GGM.001004

Monosaccharide Counts

FucCount 1 EdwardsLab
GalCount 2 EdwardsLab
GlcNAcCount 4 EdwardsLab
HexCount 5 EdwardsLab
HexNAcCount 4 EdwardsLab
ManCount 3 EdwardsLab
MonosaccharideCount 11 EdwardsLab
NeuAcCount 1 EdwardsLab
SiaCount 1 EdwardsLab
dHexCount 1 EdwardsLab
MonosaccharideCount 11 GlyTouCan

Cross Reference

GlyGen G00480KJ EdwardsLab
GNOme G00480KJ GNOme
GlyCosmos G00480KJ GlyCosmos
GLYCOSCIENCES.de 26584 GlyTouCan
GlyTouCan G00480KJ GlyTouCan
GlycomeDB 14929 GlyTouCan
PubChem CID91849565, SID252281255 GlyTouCan

Glycan Motif

ClassMotif GGM.001001, GGM.001004, GGM.001027 GlycoMotif
Motif GGM.000001 GlycoMotif
StrictClassMotif GGM.001001, GGM.001004, GGM.001027 GlycoMotif
StrictMotif GGM.000001 GlycoMotif

Subsumption

Ancestor G08293MJ, G11423UZ, G23753FY, G25130GP, G35200SM, G54382UL, G56604QF, G70382FA, G84452RH GNOme
BaseComposition G70382FA GNOme
Composition G54382UL GNOme
Level Saccharide GNOme
MissingScore 0 GNOme
SubsumedBy G23753FY GNOme
Topology G23753FY GNOme

Glycan Structure

Composition false EdwardsLab
FullyDetermined true EdwardsLab
HasMonosaccharide Fuc, Gal, GlcNAc, Hex, HexNAc, Man, NeuAc, Sia, dHex EdwardsLab
HasRepeat false EdwardsLab
ReducingEnd GlcNAc, HexNAc EdwardsLab
UndeterminedTopology false EdwardsLab