G00565QJ

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Sequence

GlycoCT

RES 1b:x-dglc-HEX-1:5 2s:n-acetyl 3b:b-dglc-HEX-1:5 4s:n-acetyl 5b:b-dman-HEX-1:5 6b:a-dman-HEX-1:5 7b:b-dglc-HEX-1:5 8s:n-acetyl 9b:a-dman-HEX-1:5 10b:x-dglc-HEX-1:5 11s:n-acetyl LIN 1:1d(2+1)2n 2:1o(4+1)3d 3:3d(2+1)4n 4:3o(4+1)5d 5:5o(3+1)6d 6:5o(4+1)7d 7:7d(2+1)8n 8:5o(6+1)9d 9:9o(-1+1)10d 10:10d(2+1)11n

EdwardsLab
GlycoWorkBench

redEnd--?D-?-D-Glcp,p(--2NAc)--4b1D-b-D-Glcp,p(--2NAc)--4b1D-b-D-Manp,p((--3a1D-a-D-Manp,p)--4b1D-b-D-Glcp,p--2NAc)--6a1D-a-D-Manp,p--??1D-?-D-Glcp,p--2NAc$MONO,perMe,Na,0,redEnd

EdwardsLab
IUPAC

alpha-D-Manp-(1->3)[beta-D-GlcpNAc-(1->4)][?-D-GlcpNAc-(1->?)-alpha-D-Manp-(1->6)]-beta-D-Manp-(1->4)-beta-D-GlcpNAc-(1->4)-?-D-GlcpNAc-(1->

EdwardsLab
IUPAC

alpha-D-Manp-(1->3)[beta-D-GlcpNAc-(1->4)][?-D-GlcpNAc-(1->?)-alpha-D-Manp-(1->6)]-beta-D-Manp-(1->4)-beta-D-GlcpNAc-(1->4)-?-D-GlcpNAc-(1->

GlyCosmos
WURCS

WURCS=2.0/4,7,6/[a2122h-1x_1-5_2*NCC/3=O][a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5]/1-2-3-4-2-4-1/a4-b1_b4-c1_c3-d1_c4-e1_c6-f1_f?-g1

GlyTouCan

Species

FruitFly Evidence Composition closure of G39213VZ via G15843XU
Composition closure of G39943KJ via G15843XU
EdwardsLab
Human Evidence Composition closure of G05421KO via G15843XU
Composition closure of G09319JK via G15843XU
Composition closure of G11453BM via G15843XU
Composition closure of G11829TU via G15843XU
Composition closure of G13269QI via G15843XU
Composition closure of G14296HB via G15843XU
Composition closure of G25432QA via G15843XU
Composition closure of G30633FJ via G15843XU
Composition closure of G39213VZ via G15843XU
Composition closure of G39943KJ via G15843XU
Composition closure of G42679AH via G15843XU
Composition closure of G43804CX via G15843XU
Composition closure of G44046WQ via G15843XU
Composition closure of G50707YR via G15843XU
Composition closure of G56175ED via G15843XU
Composition closure of G61283FH via G15843XU
Composition closure of G70308HL via G15843XU
Composition closure of G72108VJ via G15843XU
Composition closure of G78368CZ via G15843XU
Composition closure of G84678BK via G15843XU
Composition closure of G88876JQ via G15843XU
Composition closure of G96399PG via G15843XU
Composition closure of G98140IX via G15843XU
EdwardsLab
Mouse Evidence Subsumption of G30915AU
Subsumption of G74916CC
EdwardsLab
Rat Evidence Subsumption of G30915AU EdwardsLab
SARS Evidence Composition closure of G39943KJ via G15843XU EdwardsLab

Molecular Weight

PermethylatedMW 1638.84647723 EdwardsLab
UnderivitizedMW 1316.48652562 EdwardsLab
UnderivitizedMW 1316.486525 GlyTouCan

Classification

GlycanSubtype N-linked bisected GlycoMotif:GGM.001023
GlycanType N-linked GlycoMotif:GGM.001023

Monosaccharide Counts

GlcNAcCount 4 EdwardsLab
HexCount 3 EdwardsLab
HexNAcCount 4 EdwardsLab
ManCount 3 EdwardsLab
MonosaccharideCount 7 EdwardsLab
MonosaccharideCount 7 GlyTouCan

Cross Reference

GlyGen G00565QJ EdwardsLab
GNOme G00565QJ GNOme
GlyCosmos G00565QJ GlyCosmos
GlyTouCan G00565QJ GlyTouCan

Glycan Motif

ClassMotif GGM.001001, GGM.001023, GGM.001027 GlycoMotif
StrictClassMotif GGM.001001, GGM.001023, GGM.001027 GlycoMotif

Subsumption

Ancestor G00784PW, G13325UO, G15843XU, G35029YA, G58451IT, G58745PD, G59852AZ, G62922WK, G69008IB, G80012SO, G92185NI, G97154ET GNOme
BaseComposition G35029YA GNOme
Composition G15843XU GNOme
Descendant G30915AU, G74916CC GNOme
FullyDetermined G74916CC GNOme
Level Saccharide GNOme
MissingScore 250 GNOme
SubsumedBy G62922WK, G69008IB GNOme
Subsumes G30915AU GNOme
Topology G69008IB GNOme

Glycan Structure

Composition false EdwardsLab
FullyDetermined false EdwardsLab
HasMonosaccharide GlcNAc, Hex, HexNAc, Man EdwardsLab
HasRepeat false EdwardsLab
ReducingEnd GlcNAc, HexNAc EdwardsLab
UndeterminedTopology false EdwardsLab