G00606LX

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Sequence

GlycoCT

RES 1b:x-dglc-HEX-1:5 2s:n-acetyl 3b:b-dglc-HEX-1:5 4s:n-acetyl 5b:b-dman-HEX-1:5 6b:a-dman-HEX-1:5 7b:b-dglc-HEX-1:5 8s:n-acetyl 9b:a-lgal-HEX-1:5|6:d 10b:b-dgal-HEX-1:5 11b:b-dglc-HEX-1:5 12s:n-acetyl 13b:a-lgal-HEX-1:5|6:d 14b:b-dgal-HEX-1:5 15b:a-dman-HEX-1:5 16b:b-dglc-HEX-1:5 17s:n-acetyl 18b:a-lgal-HEX-1:5|6:d 19b:b-dgal-HEX-1:5 20b:b-dglc-HEX-1:5 21s:n-acetyl 22b:a-lgal-HEX-1:5|6:d 23b:b-dgal-HEX-1:5 24b:a-lgal-HEX-1:5|6:d LIN 1:1d(2+1)2n 2:1o(4+1)3d 3:3d(2+1)4n 4:3o(4+1)5d 5:5o(3+1)6d 6:6o(2+1)7d 7:7d(2+1)8n 8:7o(3+1)9d 9:7o(4+1)10d 10:6o(4+1)11d 11:11d(2+1)12n 12:11o(3+1)13d 13:11o(4+1)14d 14:5o(6+1)15d 15:15o(2+1)16d 16:16d(2+1)17n 17:16o(3+1)18d 18:16o(4+1)19d 19:15o(6+1)20d 20:20d(2+1)21n 21:20o(3+1)22d 22:20o(4+1)23d 23:1o(6+1)24d

GlyTouCan
GlycoWorkBench

redEnd--?D-?-D-Glcp,p((--2NAc)--4b1D-b-D-Glcp,p(--2NAc)--4b1D-b-D-Manp,p(--3a1D-a-D-Manp,p(--2b1D-b-D-Glcp,p((--2NAc)--3a1L-a-L-Fucp,p)--4b1D-b-D-Galp,p)--4b1D-b-D-Glcp,p((--2NAc)--3a1L-a-L-Fucp,p)--4b1D-b-D-Galp,p)--6a1D-a-D-Manp,p(--2b1D-b-D-Glcp,p((--2NAc)--3a1L-a-L-Fucp,p)--4b1D-b-D-Galp,p)--6b1D-b-D-Glcp,p((--2NAc)--3a1L-a-L-Fucp,p)--4b1D-b-D-Galp,p)--6a1L-a-L-Fucp,p$MONO,perMe,Na,0,redEnd

EdwardsLab
IUPAC

beta-D-Galp-(1->4)[alpha-L-Fucp-(1->3)]-beta-D-GlcpNAc-(1->2)[beta-D-Galp-(1->4)[alpha-L-Fucp-(1->3)]-beta-D-GlcpNAc-(1->4)]-alpha-D-Manp-(1->3)[beta-D-Galp-(1->4)[alpha-L-Fucp-(1->3)]-beta-D-GlcpNAc-(1->2)[beta-D-Galp-(1->4)[alpha-L-Fucp-(1->3)]-beta-D-GlcpNAc-(1->6)]-alpha-D-Manp-(1->6)]-beta-D-Manp-(1->4)-beta-D-GlcpNAc-(1->4)[alpha-L-Fucp-(1->6)]-?-D-GlcpNAc-(1->

EdwardsLab
IUPAC

beta-D-Galp-(1->4)[alpha-L-Fucp-(1->3)]-beta-D-GlcpNAc-(1->2)[beta-D-Galp-(1->4)[alpha-L-Fucp-(1->3)]-beta-D-GlcpNAc-(1->4)]-alpha-D-Manp-(1->3)[beta-D-Galp-(1->4)[alpha-L-Fucp-(1->3)]-beta-D-GlcpNAc-(1->2)[beta-D-Galp-(1->4)[alpha-L-Fucp-(1->3)]-beta-D-GlcpNAc-(1->6)]-alpha-D-Manp-(1->6)]-beta-D-Manp-(1->4)-beta-D-GlcpNAc-(1->4)[alpha-L-Fucp-(1->6)]-?-D-GlcpNAc-(1->

GlyCosmos
WURCS

WURCS=2.0/6,18,17/[a2122h-1x_1-5_2*NCC/3=O][a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5][a1221m-1a_1-5][a2112h-1b_1-5]/1-2-3-4-2-5-6-2-5-6-4-2-5-6-2-5-6-5/a4-b1_a6-r1_b4-c1_c3-d1_c6-k1_d2-e1_d4-h1_e3-f1_e4-g1_h3-i1_h4-j1_k2-l1_k6-o1_l3-m1_l4-n1_o3-p1_o4-q1

GlyTouCan

Taxonomy

Taxonomy 9606 GlyTouCan:G00606LX

Species

Human Evidence GlyTouCan:G00606LX TaxID 9606
No N-linked Xyl and no NeuGc, Alt
EdwardsLab

Molecular Weight

PermethylatedMW 3815.94426275 EdwardsLab
UnderivitizedMW 3101.14610918 EdwardsLab
UnderivitizedMW 3101.1461078 GlyTouCan

Classification

GlycanSubtype N-linked complex GlycoMotif:GGM.001004
GlycanSubtype N-linked core-fucosylated GlycoMotif:GGM.001024
GlycanSubtype N-linked arm-fucosylated GlycoMotif:GGM.001025
GlycanType N-linked GlycoMotif:GGM.001004

Monosaccharide Counts

FucCount 5 EdwardsLab
GalCount 4 EdwardsLab
GlcNAcCount 6 EdwardsLab
HexCount 7 EdwardsLab
HexNAcCount 6 EdwardsLab
ManCount 3 EdwardsLab
MonosaccharideCount 18 EdwardsLab
dHexCount 5 EdwardsLab
MonosaccharideCount 18 GlyTouCan

Cross Reference

GlyGen G00606LX EdwardsLab
GNOme G00606LX GNOme
GlyCosmos G00606LX GlyCosmos
CFG carbNlink_31722_A GlyTouCan
GlyTouCan G00606LX GlyTouCan
GlycomeDB 22047 GlyTouCan
KEGG G07128 GlyTouCan
PubChem CID71297975, SID252287607 GlyTouCan

Glycan Motif

ClassMotif GGM.001001, GGM.001004, GGM.001024, GGM.001025, GGM.001027 GlycoMotif
Motif GGM.000001, GGM.000018 GlycoMotif
StrictClassMotif GGM.001001, GGM.001004, GGM.001024, GGM.001025, GGM.001027 GlycoMotif
StrictMotif GGM.000001, GGM.000018 GlycoMotif

Subsumption

Ancestor G26997WR, G52890YB, G65147VW, G72093CP, G78811TO, G80669SJ, G89466MK GNOme
BaseComposition G78811TO GNOme
Composition G72093CP GNOme
Descendant G70830AN GNOme
FullyDetermined G70830AN GNOme
Level Saccharide GNOme
MissingScore 38 GNOme
SubsumedBy G89466MK GNOme
Subsumes G70830AN GNOme
Topology G26997WR GNOme

Glycan Structure

Composition false EdwardsLab
FullyDetermined true EdwardsLab
HasMonosaccharide Fuc, Gal, GlcNAc, Hex, HexNAc, Man, dHex EdwardsLab
HasRepeat false EdwardsLab
ReducingEnd GlcNAc, HexNAc EdwardsLab
UndeterminedTopology false EdwardsLab