G00912UN

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Names

Byonic HexNAc(4)Hex(5)NeuAc(2) EdwardsLab
ShortComp H5N4S2 EdwardsLab
ShortUniCarbKB HexNAc4Hex5NeuAc2 EdwardsLab
UniCarbKB HexNAc4Hex5dHex0NeuAc2NeuGc0Pent0S0P0KDN0HexA0 EdwardsLab

Sequence

GlycoCT

RES 1b:x-HEX-x:x 2b:x-HEX-x:x 3b:x-HEX-x:x 4b:x-HEX-x:x 5b:x-HEX-x:x 6b:x-dgro-dgal-NON-x:x|1:a|2:keto|3:d 7s:n-acetyl 8b:x-dgro-dgal-NON-x:x|1:a|2:keto|3:d 9s:n-acetyl 10b:x-HEX-x:x 11s:n-acetyl 12b:x-HEX-x:x 13s:n-acetyl 14b:x-HEX-x:x 15s:n-acetyl 16b:x-HEX-x:x 17s:n-acetyl LIN 1:6d(5+1)7n 2:8d(5+1)9n 3:10d(2+1)11n 4:12d(2+1)13n 5:14d(2+1)15n 6:16d(2+1)17n

EdwardsLab
WURCS

WURCS=2.0/3,11,10/[AUd21122h_5*NCC/3=O][uxxxxh_2*NCC/3=O][uxxxxh]/1-1-2-2-2-2-3-3-3-3-3/a?|b?|c?|d?|e?|f?|g?|h?|i?|j?|k?}-{a?|b?|c?|d?|e?|f?|g?|h?|i?|j?|k?_a?|b?|c?|d?|e?|f?|g?|h?|i?|j?|k?}-{a?|b?|c?|d?|e?|f?|g?|h?|i?|j?|k?_a?|b?|c?|d?|e?|f?|g?|h?|i?|j?|k?}-{a?|b?|c?|d?|e?|f?|g?|h?|i?|j?|k?_a?|b?|c?|d?|e?|f?|g?|h?|i?|j?|k?}-{a?|b?|c?|d?|e?|f?|g?|h?|i?|j?|k?_a?|b?|c?|d?|e?|f?|g?|h?|i?|j?|k?}-{a?|b?|c?|d?|e?|f?|g?|h?|i?|j?|k?_a?|b?|c?|d?|e?|f?|g?|h?|i?|j?|k?}-{a?|b?|c?|d?|e?|f?|g?|h?|i?|j?|k?_a?|b?|c?|d?|e?|f?|g?|h?|i?|j?|k?}-{a?|b?|c?|d?|e?|f?|g?|h?|i?|j?|k?_a?|b?|c?|d?|e?|f?|g?|h?|i?|j?|k?}-{a?|b?|c?|d?|e?|f?|g?|h?|i?|j?|k?_a?|b?|c?|d?|e?|f?|g?|h?|i?|j?|k?}-{a?|b?|c?|d?|e?|f?|g?|h?|i?|j?|k?_a?|b?|c?|d?|e?|f?|g?|h?|i?|j?|k?}-{a?|b?|c?|d?|e?|f?|g?|h?|i?|j?|k?

GlyTouCan

Taxonomy

Taxonomy 2697049 GLYDS000479
Taxonomy 9606 GPTwiki:G00912UN
Taxonomy 9606, 10116, 2697049 UniCarbKB:comp_HexNAc4Hex5dHex0NeuAc2NeuGc0Pent0S0P0KDN0HexA0

Species

Human Evidence GPTwiki:G00912UN TaxID 9606
No N-linked Xyl and no NeuGc, Alt
UniCarbKB:comp_HexNAc4Hex5dHex0NeuAc2NeuGc0Pent0S0P0KDN0HexA0 TaxID 9606
EdwardsLab
Mouse Evidence Subsumption of G14047PA
Subsumption of G15945ON
Subsumption of G25067TK
Subsumption of G32648IV
Subsumption of G37284MY
Subsumption of G48414YA
Subsumption of G52971DE
Subsumption of G62387ZO
Subsumption of G69303AY
Subsumption of G73866ZM
Subsumption of G77252PU
Subsumption of G84467IZ
Subsumption of G88495BI
EdwardsLab
Rat Evidence No N-linked Xyl and no Alt
UniCarbKB:comp_HexNAc4Hex5dHex0NeuAc2NeuGc0Pent0S0P0KDN0HexA0 TaxID 10116
EdwardsLab
SARS Evidence GLYDS000479 TaxID 2697049
UniCarbKB:comp_HexNAc4Hex5dHex0NeuAc2NeuGc0Pent0S0P0KDN0HexA0 TaxID 2697049
EdwardsLab

Molecular Weight

PermethylatedMW 2769.39335862 EdwardsLab
UnderivitizedMW 2222.78300589 EdwardsLab
UnderivitizedMW 2222.7830049 GlyTouCan

Classification

GlycanSubtype Glycosphingolipid lacto series Subsumption:G85508HP
GlycanSubtype N-linked bisected, N-linked hybrid Subsumption:G02891NH
GlycanSubtype N-linked complex Subsumption:G03277UZ
GlycanSubtype Glycosphingolipid neo-lacto series Subsumption:G12932IO
GlycanSubtype N-linked truncated Subsumption:G20257WW
GlycanType N-linked Subsumption:G02891NH
GlycanType Glycosphingolipid Subsumption:G12932IO

Monosaccharide Counts

HexCount 5 EdwardsLab
HexNAcCount 4 EdwardsLab
MonosaccharideCount 11 EdwardsLab
NeuAcCount 2 EdwardsLab
SiaCount 2 EdwardsLab
MonosaccharideCount 11 GlyTouCan

Cross Reference

GlyGen G00912UN EdwardsLab
GNOme G00912UN GNOme
GlyCosmos G00912UN GlyCosmos
GlyTouCan G00912UN GlyTouCan
UniCarbKB comp_HexNAc4Hex5dHex0NeuAc2NeuGc0Pent0S0P0KDN0HexA0 UniCarbKB

Publications

Publication 2136357, 9884403, 16321355, 22171320, 23345538, 24090084, 24393138, 24766575, 24841998, 26598643, 26791533, 29671580, 30459171, 30659065, 32366695, 32841605 UniCarbKB:comp_HexNAc4Hex5dHex0NeuAc2NeuGc0Pent0S0P0KDN0HexA0

Subsumption

Ancestor G49174JP GNOme
BaseComposition G49174JP GNOme
Composition G00912UN GNOme
Descendant G00875VP, G01891JS, G02891NH, G03277UZ, G04791YX, G06900UR, G06981MP, G08482AW, G08997GC, G10058ZS, G10308PQ, G10897DJ, G12852SA, G12873UA, G12932IO, G13140RC, G14047PA, G14905AZ, G15286HU, G15945ON, G16437LH, G17652MS, G19652EM, G20257WW, G20966IA, G24107UL, G25067TK, G25886YT, G26065RX, G26762AY, G26877ST, G27476HK, G27817LK, G29895LZ, G30252GL, G30444XG, G31316SG, G31438WA, G32216QH, G32648IV, G33233SX, G34449FW, G35005RC, G35621GU, G35722YG, G37020YV, G37284MY, G37997JT, G38296AM, G38445HB, G38851IY, G39027MU, G39764AC, G42358LZ, G43177PB, G43679GQ, G43843IY, G45522SR, G45844RR, G47832TO, G48339YN, G48414YA, G50559WI, G51793MY, G52971DE, G53276NK, G54306CN, G54555OW, G56082OV, G56616DG, G56657CK, G58235TZ, G58489ZK, G59405LU, G59616TT, G60736DD, G61831UB, G62210XY, G62387ZO, G63648EU, G65087VI, G65508OC, G66457WL, G66724VW, G66788KX, G67355XO, G68865YV, G69046CR, G69235GE, G69265CM, G69303AY, G69944KZ, G70013RS, G70898AL, G72171BV, G72527VN, G73366EA, G73866ZM, G74498IP, G75501QM, G75623KU, G76099KH, G77252PU, G78116WJ, G78644SZ, G79342RE, G80123ZU, G81328FA, G82130LG, G82368PU, G82868SO, G83232VZ, G83845ZV, G84467IZ, G84648AY, G85478BZ, G85508HP, G88495BI, G90099GV, G90477RA, G90672BM, G91208CS, G92466CT, G93529RD, G93891IZ, G94649IC, G95660LN, G96171ES, G96955HB, G97545TB, G97599MN, G98205FV, G98212GQ, G99843HL GNOme
FullyDetermined G01891JS, G04791YX, G08997GC, G10897DJ, G14047PA, G14905AZ, G15286HU, G15945ON, G16437LH, G26762AY, G29895LZ, G32648IV, G39027MU, G39764AC, G45522SR, G51793MY, G56657CK, G60736DD, G65508OC, G70013RS, G74498IP, G75501QM, G77252PU, G78116WJ, G79342RE, G81328FA, G82130LG, G83845ZV, G84467IZ, G84648AY, G91208CS, G92466CT GNOme
Level Composition GNOme
MissingScore 7545 GNOme
SubsumedBy G49174JP GNOme
Subsumes G06981MP, G10058ZS, G13140RC, G43177PB, G48414YA, G62210XY GNOme
Topologies G62210XY GNOme

Glycan Structure

Composition true EdwardsLab
FullyDetermined false EdwardsLab
HasMonosaccharide Hex, HexNAc, NeuAc, Sia EdwardsLab
HasRepeat false EdwardsLab
UndeterminedTopology false EdwardsLab