G04857UT

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Sequence

GlycoCT

RES 1b:x-dglc-HEX-x:x 2b:x-dgal-HEX-1:5 3b:x-dglc-HEX-1:5 4s:n-acetyl 5b:x-dgal-HEX-1:5 6b:x-dgro-dgal-NON-2:6|1:a|2:keto|3:d 7s:n-acetyl 8b:x-lgal-HEX-1:5|6:d 9b:x-dglc-HEX-1:5 10s:n-acetyl 11b:x-dgal-HEX-1:5 LIN 1:1o(-1+1)2d 2:2o(-1+1)3d 3:3d(2+1)4n 4:3o(-1+1)5d 5:5o(-1+2)6d 6:6d(5+1)7n 7:3o(-1+1)8d 8:2o(-1+1)9d 9:9d(2+1)10n 10:9o(-1+1)11d

GlyTouCan
GlycoWorkBench

redEnd--?D-?-D-Glc--??1D-?-D-Galp,p(--??1D-?-D-Glcp,p((--2NAc)--??1D-?-D-Galp,p--??2D-?-D-Neup,p--5NAc)--??1L-?-L-Fucp,p)--??1D-?-D-Glcp,p(--2NAc)--??1D-?-D-Galp,p$MONO,perMe,Na,0,redEnd

EdwardsLab
IUPAC

?-D-Neup5Ac-(2->?)-?-D-Galp-(1->?)[?-L-Fucp-(1->?)]-?-D-GlcpNAc-(1->?)[?-D-Galp-(1->?)-?-D-GlcpNAc-(1->?)]-?-D-Galp-(1->?)-?-D-Glc

EdwardsLab
IUPAC

?-D-Neup5Ac-(2->?)-?-D-Galp-(1->?)[?-L-Fucp-(1->?)]-?-D-GlcpNAc-(1->?)[?-D-Galp-(1->?)-?-D-GlcpNAc-(1->?)]-?-D-Galp-(1->?)-D-Glc

GlyCosmos
WURCS

WURCS=2.0/5,8,7/[u2122h][a2112h-1x_1-5][a2122h-1x_1-5_2*NCC/3=O][Aad21122h-2x_2-6_5*NCC/3=O][a1221m-1x_1-5]/1-2-3-2-4-5-3-2/a?-b1_b?-c1_b?-g1_c?-d1_c?-f1_d?-e2_g?-h1

GlyTouCan

Species

Human Evidence Subsumption of G09533NV
Subsumption of G10377CG
Subsumption of G23333KI
EdwardsLab

Molecular Weight

PermethylatedMW 1887.9564813 EdwardsLab
UnderivitizedMW 1509.53392942 EdwardsLab
UnderivitizedMW 1509.5339287 GlyTouCan

Classification

GlycanSubtype Glycosphingolipid lacto series GlycoMotif:GGM.001106
GlycanSubtype Glycosphingolipid neo-lacto series GlycoMotif:GGM.001107
GlycanType Glycosphingolipid GlycoMotif:GGM.001106

Monosaccharide Counts

FucCount 1 EdwardsLab
GalCount 3 EdwardsLab
GlcCount 1 EdwardsLab
GlcNAcCount 2 EdwardsLab
HexCount 4 EdwardsLab
HexNAcCount 2 EdwardsLab
MonosaccharideCount 8 EdwardsLab
NeuAcCount 1 EdwardsLab
SiaCount 1 EdwardsLab
dHexCount 1 EdwardsLab
MonosaccharideCount 8 GlyTouCan

Cross Reference

GlyGen G04857UT EdwardsLab
GNOme G04857UT GNOme
GlyCosmos G04857UT GlyCosmos
GlyTouCan G04857UT GlyTouCan

Glycan Motif

ClassMotif GGM.001106, GGM.001107 GlycoMotif
Motif GGM.000001, GGM.000005, GGM.000018, GGM.000020, GGM.000022, GGM.000024, GGM.000034 GlycoMotif

Subsumption

Ancestor G36011HK, G39916IH, G40309AV, G87346MV GNOme
BaseComposition G40309AV GNOme
Composition G87346MV GNOme
Descendant G09533NV, G10377CG, G23333KI, G40104OM, G65166VR, G67935HZ GNOme
FullyDetermined G40104OM GNOme
Level Topology GNOme
MissingScore 1122 GNOme
Saccharides G09533NV, G10377CG GNOme
SubsumedBy G87346MV GNOme
Subsumes G09533NV, G10377CG, G67935HZ GNOme
Topology G04857UT GNOme

Glycan Structure

Composition false EdwardsLab
FullyDetermined false EdwardsLab
HasMonosaccharide Fuc, Gal, Glc, GlcNAc, Hex, HexNAc, NeuAc, Sia, dHex EdwardsLab
HasRepeat false EdwardsLab
ReducingEnd Glc, Hex EdwardsLab
UndeterminedTopology false EdwardsLab