G10159DR

From GlycanData
Jump to navigation Jump to search

Sequence

GlycoCT

RES 1b:x-HEX-1:x 2s:n-acetyl 3b:x-HEX-1:x 4s:n-acetyl 5b:x-HEX-1:x 6b:x-HEX-1:x 7b:x-HEX-1:x 8s:n-acetyl 9b:x-HEX-1:x 10b:x-dgro-dgal-NON-2:6|1:a|2:keto|3:d 11s:n-acetyl 12b:x-HEX-1:x 13s:n-acetyl 14b:x-HEX-1:x 15b:x-HEX-1:x 16b:x-HEX-1:x 17s:n-acetyl 18b:x-HEX-1:x 19b:x-dgro-dgal-NON-2:6|1:a|2:keto|3:d 20s:n-acetyl 21b:x-HEX-1:x|6:d LIN 1:1d(2+1)2n 2:1o(-1+1)3d 3:3d(2+1)4n 4:3o(-1+1)5d 5:5o(-1+1)6d 6:6o(-1+1)7d 7:7d(2+1)8n 8:7o(-1+1)9d 9:9o(-1+2)10d 10:10d(5+1)11n 11:6o(-1+1)12d 12:12d(2+1)13n 13:12o(-1+1)14d 14:5o(-1+1)15d 15:15o(-1+1)16d 16:16d(2+1)17n 17:16o(-1+1)18d 18:18o(-1+2)19d 19:19d(5+1)20n 20:1o(-1+1)21d

EdwardsLab
WURCS

WURCS=2.0/4,14,13/[axxxxh-1x_1-?_2*NCC/3=O][axxxxh-1x_1-?][Aad21122h-2x_2-6_5*NCC/3=O][axxxxm-1x_1-?]/1-1-2-2-1-2-3-1-2-2-1-2-3-4/a?-b1_a?-n1_b?-c1_c?-d1_c?-j1_d?-e1_d?-h1_e?-f1_f?-g2_h?-i1_j?-k1_k?-l1_l?-m2

GlyTouCan

Species

Human Evidence Subsumption of G10228OD
Subsumption of G16150CJ
Subsumption of G37306TB
Subsumption of G42686NQ
Subsumption of G47961DI
Subsumption of G80537QW
Subsumption of G91905FJ
EdwardsLab
Mouse Evidence Subsumption of G45996VR
Subsumption of G64048GU
EdwardsLab
Rat Evidence Composition closure of G11629QQ via G85144OK EdwardsLab
SARS Evidence Composition closure of G11629QQ via G85144OK
Composition closure of G85144OK via G85144OK
EdwardsLab

Molecular Weight

PermethylatedMW 3392.70866415 EdwardsLab
UnderivitizedMW 2733.97311086 EdwardsLab

Classification

GlycanSubtype N-linked complex, N-linked core-fucosylated Subsumption:G01354KL
GlycanType N-linked Subsumption:G01354KL

Monosaccharide Counts

HexCount 6 EdwardsLab
HexNAcCount 5 EdwardsLab
MonosaccharideCount 14 EdwardsLab
NeuAcCount 2 EdwardsLab
SiaCount 2 EdwardsLab
dHexCount 1 EdwardsLab

Cross Reference

GlyGen G10159DR EdwardsLab
GNOme G10159DR GNOme
GlyCosmos G10159DR GlyCosmos
GlyTouCan G10159DR GlyTouCan

Glycan Motif

ClassMotif GGM.001027 GlycoMotif
StrictClassMotif GGM.001027 GlycoMotif

Subsumption

Ancestor G25569EP, G85144OK GNOme
BaseComposition G25569EP GNOme
Composition G85144OK GNOme
Descendant G01354KL, G03075ZE, G05314WL, G07003AA, G10228OD, G15730FJ, G16150CJ, G18724OW, G20652QD, G20919FV, G25460BQ, G31662BR, G37306TB, G42686NQ, G45720CA, G45996VR, G47280HM, G47961DI, G50554LM, G58571IP, G59345UT, G64048GU, G64936OS, G65079ZY, G79088GV, G80537QW, G84981PB, G87489PB, G91905FJ GNOme
FullyDetermined G01354KL, G03075ZE, G10228OD, G16150CJ, G31662BR, G42686NQ, G45720CA, G47280HM, G50554LM, G65079ZY, G79088GV, G80537QW, G91905FJ GNOme
Level Topology GNOme
MissingScore 2520 GNOme
SubsumedBy G85144OK GNOme
Subsumes G05314WL, G20652QD GNOme
Topology G10159DR GNOme

Glycan Structure

Composition false EdwardsLab
FullyDetermined false EdwardsLab
HasMonosaccharide Hex, HexNAc, NeuAc, Sia, dHex EdwardsLab
HasRepeat false EdwardsLab
ReducingEnd HexNAc EdwardsLab
UndeterminedTopology false EdwardsLab