G16150CJ
Sequence
GLYCAM-IUPAC | DNeup5Aca2-3DGalpb1-4DGlcpNAcb1-4[DGalpb1-4DGlcpNAcb1-2]DManpa1-3[DNeup5Aca2-3DGalpb1-4DGlcpNAcb1-2DManpa1-6]DManpb1-4DGlcpNAcb1-4[LFucpa1-6]DGlcpNAcb1-OH |
EdwardsLab |
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GlycoCT | RES 1b:b-dglc-HEX-1:5 2s:n-acetyl 3b:b-dglc-HEX-1:5 4s:n-acetyl 5b:b-dman-HEX-1:5 6b:a-dman-HEX-1:5 7b:b-dglc-HEX-1:5 8s:n-acetyl 9b:b-dgal-HEX-1:5 10b:b-dglc-HEX-1:5 11s:n-acetyl 12b:b-dgal-HEX-1:5 13b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 14s:n-acetyl 15b:a-dman-HEX-1:5 16b:b-dglc-HEX-1:5 17s:n-acetyl 18b:b-dgal-HEX-1:5 19b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 20s:n-acetyl 21b:a-lgal-HEX-1:5|6:d LIN 1:1d(2+1)2n 2:1o(4+1)3d 3:3d(2+1)4n 4:3o(4+1)5d 5:5o(3+1)6d 6:6o(2+1)7d 7:7d(2+1)8n 8:7o(4+1)9d 9:6o(4+1)10d 10:10d(2+1)11n 11:10o(4+1)12d 12:12o(3+2)13d 13:13d(5+1)14n 14:5o(6+1)15d 15:15o(2+1)16d 16:16d(2+1)17n 17:16o(4+1)18d 18:18o(3+2)19d 19:19d(5+1)20n 20:1o(6+1)21d |
GlyTouCan |
GlycoWorkBench | redEnd--?b?D-b-D-Glcp,p((--2NAc)--4b1D-b-D-Glcp,p(--2NAc)--4b1D-b-D-Manp,p(--3a1D-a-D-Manp,p(--2b1D-b-D-Glcp,p(--2NAc)--4b1D-b-D-Galp,p)--4b1D-b-D-Glcp,p(--2NAc)--4b1D-b-D-Galp,p--3a2D-a-D-Neup,p--5NAc)--6a1D-a-D-Manp,p--2b1D-b-D-Glcp,p(--2NAc)--4b1D-b-D-Galp,p--3a2D-a-D-Neup,p--5NAc)--6a1L-a-L-Fucp,p$MONO,perMe,Na,0,redEnd |
EdwardsLab |
IUPAC | beta-D-Galp-(1->4)-beta-D-GlcpNAc-(1->2)[alpha-D-Neup5Ac-(2->3)-beta-D-Galp-(1->4)-beta-D-GlcpNAc-(1->4)]-alpha-D-Manp-(1->3)[alpha-D-Neup5Ac-(2->3)-beta-D-Galp-(1->4)-beta-D-GlcpNAc-(1->2)-alpha-D-Manp-(1->6)]-beta-D-Manp-(1->4)-beta-D-GlcpNAc-(1->4)[alpha-L-Fucp-(1->6)]-beta-D-GlcpNAc-(1-> |
EdwardsLab |
IUPAC | beta-D-Galp-(1->4)-beta-D-GlcpNAc-(1->2)[alpha-D-Neup5Ac-(2->3)-beta-D-Galp-(1->4)-beta-D-GlcpNAc-(1->4)]-alpha-D-Manp-(1->3)[alpha-D-Neup5Ac-(2->3)-beta-D-Galp-(1->4)-beta-D-GlcpNAc-(1->2)-alpha-D-Manp-(1->6)]-beta-D-Manp-(1->4)-beta-D-GlcpNAc-(1->4)[alpha-L-Fucp-(1->6)]-beta-D-GlcpNAc-(1-> |
GlyCosmos |
WURCS | WURCS=2.0/6,14,13/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5][a2112h-1b_1-5][Aad21122h-2a_2-6_5*NCC/3=O][a1221m-1a_1-5]/1-1-2-3-1-4-1-4-5-3-1-4-5-6/a4-b1_a6-n1_b4-c1_c3-d1_c6-j1_d2-e1_d4-g1_e4-f1_g4-h1_h3-i2_j2-k1_k4-l1_l3-m2 |
GlyTouCan |
Taxonomy
Taxonomy | 9606 | GlyConnectStructure:3541 |
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Taxonomy | 9606 | UniCarbKB:1693 |
Species
Human Evidence | GlyConnectStructure:3541 TaxID 9606 No N-linked Xyl and no NeuGc, Alt UniCarbKB:1693 TaxID 9606 |
EdwardsLab |
---|---|---|
Mouse Evidence | Composition closure of G58848QS via G58076ER Composition closure of G64048GU via G58076ER Composition closure of G75977KH via G58076ER |
EdwardsLab |
Molecular Weight
PermethylatedMW | 3392.70866415 | EdwardsLab |
---|---|---|
UnderivitizedMW | 2733.97311086 | EdwardsLab |
UnderivitizedMW | 2733.9731097 | GlyTouCan |
Classification
GlycanSubtype | N-linked complex | GlycoMotif:GGM.001004 |
---|---|---|
GlycanSubtype | N-linked core-fucosylated | GlycoMotif:GGM.001024 |
GlycanType | N-linked | GlycoMotif:GGM.001004 |
Monosaccharide Counts
FucCount | 1 | EdwardsLab |
---|---|---|
GalCount | 3 | EdwardsLab |
GlcNAcCount | 5 | EdwardsLab |
HexCount | 6 | EdwardsLab |
HexNAcCount | 5 | EdwardsLab |
ManCount | 3 | EdwardsLab |
MonosaccharideCount | 14 | EdwardsLab |
NeuAcCount | 2 | EdwardsLab |
SiaCount | 2 | EdwardsLab |
dHexCount | 1 | EdwardsLab |
MonosaccharideCount | 14 | GlyTouCan |
Cross Reference
GlyGen | G16150CJ | EdwardsLab |
---|---|---|
GNOme | G16150CJ | GNOme |
GlyCosmos | G16150CJ | GlyCosmos |
GlyConnectStructure | 3541 | GlyTouCan |
GlyTouCan | G16150CJ | GlyTouCan |
UniCarbKB | 1693 | UniCarbKB |
Publications
Publication | 3571205 | UniCarbKB:1693 |
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Glycan Motif
ClassMotif | GGM.001001, GGM.001004, GGM.001024, GGM.001027 | GlycoMotif |
---|---|---|
Motif | GGM.000001, GGM.000034 | GlycoMotif |
StrictClassMotif | GGM.001001, GGM.001004, GGM.001024, GGM.001027 | GlycoMotif |
StrictMotif | GGM.000001, GGM.000034 | GlycoMotif |
Subsumption
Ancestor | G00553AN, G00800WJ, G01450UB, G01543ZX, G05314WL, G05797TN, G06215XQ, G07003AA, G10159DR, G11629QQ, G15212GE, G20510FY, G22427ZK, G23028IO, G25569EP, G26302TI, G26985YI, G28149YN, G36798UJ, G37626QS, G38541LS, G41929NX, G44246UD, G48789OQ, G49917IO, G52754KY, G54338PJ, G57776ZS, G58076ER, G58232MG, G58848QS, G59345UT, G59699IB, G60282LL, G66150ZZ, G74269EB, G78608GK, G79939YZ, G81604RU, G81670RK, G85144OK, G87489PB, G87519TU, G94571WF | GNOme |
---|---|---|
BaseComposition | G25569EP | GNOme |
Composition | G58076ER | GNOme |
Level | Saccharide | GNOme |
MissingScore | 0 | GNOme |
SubsumedBy | G00800WJ, G01543ZX, G59345UT, G78608GK, G87489PB, G87519TU | GNOme |
Topology | G05314WL | GNOme |
Glycan Structure
Composition | false | EdwardsLab |
---|---|---|
FullyDetermined | true | EdwardsLab |
HasMonosaccharide | Fuc, Gal, GlcNAc, Hex, HexNAc, Man, NeuAc, Sia, dHex | EdwardsLab |
HasRepeat | false | EdwardsLab |
ReducingEnd | GlcNAc, HexNAc | EdwardsLab |
UndeterminedTopology | false | EdwardsLab |