G25713RA

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Sequence

GlycoCT

RES 1b:b-dglc-HEX-1:5 2b:x-lgal-HEX-1:5|6:d 3s:n-acetyl 4b:b-dglc-HEX-1:5 5s:n-acetyl 6b:b-dman-HEX-1:5 7b:a-dman-HEX-1:5 8b:b-dglc-HEX-1:5 9s:n-acetyl 10b:b-dgal-HEX-1:5 11b:a-dman-HEX-1:5 12b:b-dglc-HEX-1:5 13s:n-acetyl 14b:b-dgal-HEX-1:5 15b:b-dglc-HEX-1:5 16s:n-acetyl 17b:b-dgal-HEX-1:5 LIN 1:1o(-1+1)2d 2:1d(2+1)3n 3:1o(4+1)4d 4:4d(2+1)5n 5:4o(4+1)6d 6:6o(-1+1)7d 7:7o(2+1)8d 8:8d(2+1)9n 9:8o(4+1)10d 10:6o(-1+1)11d 11:11o(2+1)12d 12:12d(2+1)13n 13:12o(4+1)14d 14:11o(6+1)15d 15:15d(2+1)16n 16:15o(4+1)17d UND UND1:100.0:100.0 ParentIDs:1|2|4|6|7|8|10|11|12|14|15|17 SubtreeLinkageID1:o(6+2)d RES 18b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 19s:n-acetyl LIN 17:18d(5+1)19n UND2:100.0:100.0 ParentIDs:1|2|4|6|7|8|10|11|12|14|15|17 SubtreeLinkageID1:o(6+2)d RES 20b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 21s:n-acetyl LIN 18:20d(5+1)21n

GlyTouCan
GlycoWorkBench

redEnd--?b?D-b-D-Glcp,p((--2NAc)--4b1D-b-D-Glcp,p(--2NAc)--4b1D-b-D-Manp,p(--?a1D-a-D-Manp,p(--2b1D-b-D-Glcp,p(--2NAc)--4b1D-b-D-Galp,p)--6b1D-b-D-Glcp,p(--2NAc)--4b1D-b-D-Galp,p)--?a1D-a-D-Manp,p--2b1D-b-D-Glcp,p(--2NAc)--4b1D-b-D-Galp,p)--??1L-?-L-Fucp,p}(--6a?D-a-D-Neup,p--5NAc)--6a?D-a-D-Neup,p--5NAc$MONO,perMe,Na,0,redEnd

EdwardsLab
WURCS

WURCS=2.0/6,14,13/[a2122h-1b_1-5_2*NCC/3=O][a1221m-1x_1-5][a1122h-1b_1-5][a1122h-1a_1-5][a2112h-1b_1-5][Aad21122h-2a_2-6_5*NCC/3=O]/1-2-1-3-4-1-5-1-5-4-1-5-6-6/a4-c1_c4-d1_e2-f1_e6-h1_f4-g1_h4-i1_j2-k1_k4-l1_m2-a6|b6|c6|d6|e6|f6|g6|h6|i6|j6|k6|l6}_n2-a6|b6|c6|d6|e6|f6|g6|h6|i6|j6|k6|l6}_a?-b1_d?-e1_d?-j1

GlyTouCan

Taxonomy

Taxonomy 9606 GlyConnectStructure:3315

Species

Human Evidence GlyConnectStructure:3315 TaxID 9606
No N-linked Xyl and no NeuGc, Alt
EdwardsLab
Mouse Evidence Composition closure of G58848QS via G58076ER
Composition closure of G64048GU via G58076ER
Composition closure of G75977KH via G58076ER
EdwardsLab

Molecular Weight

PermethylatedMW 3392.70866415 EdwardsLab
UnderivitizedMW 2733.97311086 EdwardsLab
UnderivitizedMW 2733.9731097 GlyTouCan

Classification

GlycanSubtype N-linked complex GlycoMotif:GGM.001004
GlycanSubtype N-linked core-fucosylated GlycoMotif:GGM.001024
GlycanType N-linked GlycoMotif:GGM.001004

Monosaccharide Counts

FucCount 1 EdwardsLab
GalCount 3 EdwardsLab
GlcNAcCount 5 EdwardsLab
HexCount 6 EdwardsLab
HexNAcCount 5 EdwardsLab
ManCount 3 EdwardsLab
MonosaccharideCount 14 EdwardsLab
NeuAcCount 2 EdwardsLab
SiaCount 2 EdwardsLab
dHexCount 1 EdwardsLab
MonosaccharideCount 14 GlyTouCan

Cross Reference

GlyGen G25713RA EdwardsLab
GNOme G25713RA GNOme
GlyCosmos G25713RA GlyCosmos
GlyConnectStructure 3315 GlyTouCan
GlyTouCan G25713RA GlyTouCan

Glycan Motif

ClassMotif GGM.001001, GGM.001004, GGM.001024, GGM.001027 GlycoMotif
Motif GGM.000001 GlycoMotif
StrictClassMotif GGM.001027 GlycoMotif
StrictMotif GGM.000001 GlycoMotif

Subsumption

Ancestor G10794HZ, G11629QQ, G23028IO, G25569EP, G26302TI, G38541LS, G44246UD, G49917IO, G52754KY, G57776ZS, G58076ER, G59699IB, G60282LL, G85144OK GNOme
BaseComposition G25569EP GNOme
Composition G58076ER GNOme
Level Saccharide GNOme
MissingScore 588 GNOme
SubsumedBy G10794HZ, G52754KY GNOme
Topology G44246UD GNOme

Glycan Structure

Composition false EdwardsLab
FullyDetermined false EdwardsLab
HasMonosaccharide Fuc, Gal, GlcNAc, Hex, HexNAc, Man, NeuAc, Sia, dHex EdwardsLab
HasRepeat false EdwardsLab
ReducingEnd GlcNAc, HexNAc EdwardsLab
UndeterminedTopology true EdwardsLab