G41929NX

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Sequence

GlycoCT

RES 1b:b-dglc-HEX-1:5 2s:n-acetyl 3b:b-dglc-HEX-1:5 4s:n-acetyl 5b:b-dman-HEX-1:5 6b:a-dman-HEX-1:5 7b:x-dglc-HEX-1:5 8s:n-acetyl 9b:b-dgal-HEX-1:5 10b:a-dman-HEX-1:5 11b:x-dglc-HEX-1:5 12s:n-acetyl 13b:b-dgal-HEX-1:5 14b:x-dglc-HEX-1:5 15s:n-acetyl 16b:b-dgal-HEX-1:5 LIN 1:1d(2+1)2n 2:1o(4+1)3d 3:3d(2+1)4n 4:3o(4+1)5d 5:5o(-1+1)6d 6:6o(-1+1)7d 7:7d(2+1)8n 8:7o(4+1)9d 9:5o(-1+1)10d 10:10o(-1+1)11d 11:11d(2+1)12n 12:11o(4+1)13d 13:10o(-1+1)14d 14:14d(2+1)15n 15:14o(4+1)16d UND UND1:100.0:100.0 ParentIDs:1|3|5|6|7|9|10|11|13|14|16 SubtreeLinkageID1:o(-1+-1)d RES 17b:x-lgal-HEX-1:5|6:d UND2:100.0:100.0 ParentIDs:1|3|5|6|7|9|10|11|13|14|16 SubtreeLinkageID1:o(-1+2)d RES 18b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 19s:n-acetyl LIN 16:18d(5+1)19n UND3:100.0:100.0 ParentIDs:1|3|5|6|7|9|10|11|13|14|16 SubtreeLinkageID1:o(-1+2)d RES 20b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 21s:n-acetyl LIN 17:20d(5+1)21n

GlyTouCan
GlycoWorkBench

redEnd--?b?D-b-D-Glcp,p(--2NAc)--4b1D-b-D-Glcp,p(--2NAc)--4b1D-b-D-Manp,p(--?a1D-a-D-Manp,p(--??1D-?-D-Glcp,p(--2NAc)--4b1D-b-D-Galp,p)--??1D-?-D-Glcp,p(--2NAc)--4b1D-b-D-Galp,p)--?a1D-a-D-Manp,p--??1D-?-D-Glcp,p(--2NAc)--4b1D-b-D-Galp,p}((--?a?D-a-D-Neup,p--5NAc)--?a?D-a-D-Neup,p--5NAc)--?L-?-L-Fucp,p$MONO,perMe,Na,0,redEnd

EdwardsLab
WURCS

WURCS=2.0/7,14,13/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5][a2122h-1x_1-5_2*NCC/3=O][a2112h-1b_1-5][Aad21122h-2a_2-6_5*NCC/3=O][a1221m-1x_1-5]/1-1-2-3-4-5-4-5-3-4-5-6-6-7/a4-b1_b4-c1_e4-f1_g4-h1_j4-k1_c?-d1_c?-i1_d?-e1_d?-g1_i?-j1_l2-a?|b?|c?|d?|e?|f?|g?|h?|i?|j?|k?}_m2-a?|b?|c?|d?|e?|f?|g?|h?|i?|j?|k?}_n?-a?|b?|c?|d?|e?|f?|g?|h?|i?|j?|k?}

GlyTouCan

Taxonomy

Taxonomy 9606 GlyConnectStructure:240

Species

Human Evidence GlyConnectStructure:240 TaxID 9606
No N-linked Xyl and no NeuGc, Alt
EdwardsLab
Mouse Evidence Composition closure of G58848QS via G58076ER
Composition closure of G64048GU via G58076ER
Composition closure of G75977KH via G58076ER
EdwardsLab

Molecular Weight

PermethylatedMW 3392.70866415 EdwardsLab
UnderivitizedMW 2733.97311086 EdwardsLab
UnderivitizedMW 2733.9731097 GlyTouCan

Classification

GlycanSubtype N-linked arm-fucosylated GlycoMotif:GGM.001025
GlycanSubtype N-linked complex GlycoMotif:GGM.001004
GlycanSubtype N-linked core-fucosylated GlycoMotif:GGM.001024
GlycanType N-linked GlycoMotif:GGM.001004

Monosaccharide Counts

FucCount 1 EdwardsLab
GalCount 3 EdwardsLab
GlcNAcCount 5 EdwardsLab
HexCount 6 EdwardsLab
HexNAcCount 5 EdwardsLab
ManCount 3 EdwardsLab
MonosaccharideCount 14 EdwardsLab
NeuAcCount 2 EdwardsLab
SiaCount 2 EdwardsLab
dHexCount 1 EdwardsLab
MonosaccharideCount 14 GlyTouCan

Cross Reference

GlyGen G41929NX EdwardsLab
GNOme G41929NX GNOme
GlyCosmos G41929NX GlyCosmos
GlyConnectStructure 240 GlyTouCan
GlyTouCan G41929NX GlyTouCan

Glycan Motif

ClassMotif GGM.001001, GGM.001004, GGM.001024, GGM.001025, GGM.001027 GlycoMotif
Motif GGM.000001, GGM.000018, GGM.000022, GGM.000034 GlycoMotif
StrictClassMotif GGM.001027 GlycoMotif

Subsumption

Ancestor G11629QQ, G23028IO, G25569EP, G26985YI, G49917IO, G57776ZS, G58076ER, G59699IB, G74269EB, G85144OK GNOme
BaseComposition G25569EP GNOme
Composition G58076ER GNOme
Descendant G01354KL, G03075ZE, G10228OD, G12425WW, G14740XE, G16150CJ, G16529MG, G18581LO, G20919FV, G24857RT, G31662BR, G35740ZG, G38022PE, G42686NQ, G45720CA, G47280HM, G61575RT, G62765SF, G72580QS, G77451VF, G80537QW, G87519TU, G89641ZV, G91905FJ GNOme
FullyDetermined G01354KL, G03075ZE, G10228OD, G16150CJ, G16529MG, G18581LO, G31662BR, G38022PE, G42686NQ, G45720CA, G47280HM, G61575RT, G62765SF, G72580QS, G80537QW, G91905FJ GNOme
Level Saccharide GNOme
MissingScore 1054 GNOme
SubsumedBy G26985YI GNOme
Subsumes G20919FV, G35740ZG, G77451VF, G87519TU GNOme
Topology G74269EB GNOme

Glycan Structure

Composition false EdwardsLab
FullyDetermined false EdwardsLab
HasMonosaccharide Fuc, Gal, GlcNAc, Hex, HexNAc, Man, NeuAc, Sia, dHex EdwardsLab
HasRepeat false EdwardsLab
ReducingEnd GlcNAc, HexNAc EdwardsLab
UndeterminedTopology true EdwardsLab