G48789OQ

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Sequence

GlycoCT

RES 1b:b-dglc-HEX-1:5 2s:n-acetyl 3b:b-dglc-HEX-1:5 4s:n-acetyl 5b:b-dman-HEX-1:5 6b:a-dman-HEX-1:5 7b:b-dglc-HEX-1:5 8s:n-acetyl 9b:b-dgal-HEX-1:5 10b:b-dglc-HEX-1:5 11s:n-acetyl 12b:b-dgal-HEX-1:5 13b:a-dman-HEX-1:5 14b:b-dglc-HEX-1:5 15s:n-acetyl 16b:b-dgal-HEX-1:5 17b:a-lgal-HEX-1:5|6:d LIN 1:1d(2+1)2n 2:1o(4+1)3d 3:3d(2+1)4n 4:3o(4+1)5d 5:5o(3+1)6d 6:6o(2+1)7d 7:7d(2+1)8n 8:7o(4+1)9d 9:6o(4+1)10d 10:10d(2+1)11n 11:10o(4+1)12d 12:5o(6+1)13d 13:13o(2+1)14d 14:14d(2+1)15n 15:14o(4+1)16d 16:1o(6+1)17d UND UND1:100.0:100.0 ParentIDs:1|3|5|6|7|9|10|12|13|14|16|17 SubtreeLinkageID1:o(-1+2)d RES 18b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 19s:n-acetyl LIN 17:18d(5+1)19n UND2:100.0:100.0 ParentIDs:1|3|5|6|7|9|10|12|13|14|16|17 SubtreeLinkageID1:o(-1+2)d RES 20b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 21s:n-acetyl LIN 18:20d(5+1)21n

EdwardsLab
GlycoWorkBench

redEnd--?b?D-b-D-Glcp,p((--2NAc)--4b1D-b-D-Glcp,p(--2NAc)--4b1D-b-D-Manp,p(--3a1D-a-D-Manp,p(--2b1D-b-D-Glcp,p(--2NAc)--4b1D-b-D-Galp,p)--4b1D-b-D-Glcp,p(--2NAc)--4b1D-b-D-Galp,p)--6a1D-a-D-Manp,p--2b1D-b-D-Glcp,p(--2NAc)--4b1D-b-D-Galp,p)--6a1L-a-L-Fucp,p}(--?a?D-a-D-Neup,p--5NAc)--?a?D-a-D-Neup,p--5NAc$MONO,perMe,Na,0,redEnd

EdwardsLab
WURCS

WURCS=2.0/6,14,13/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5][a2112h-1b_1-5][a1221m-1a_1-5][Aad21122h-2a_2-6_5*NCC/3=O]/1-1-2-3-1-4-1-4-3-1-4-5-6-6/a4-b1_a6-l1_b4-c1_c3-d1_c6-i1_d2-e1_d4-g1_e4-f1_g4-h1_i2-j1_j4-k1_m2-a?|b?|c?|d?|e?|f?|g?|h?|i?|j?|k?|l?}_n2-a?|b?|c?|d?|e?|f?|g?|h?|i?|j?|k?|l?}

GlyTouCan

Species

Human Evidence Subsumption of G01543ZX
Subsumption of G10228OD
Subsumption of G16150CJ
Subsumption of G38022PE
Subsumption of G42686NQ
Subsumption of G45661NA
Subsumption of G62765SF
EdwardsLab
Mouse Evidence Composition closure of G58848QS via G58076ER
Composition closure of G64048GU via G58076ER
Composition closure of G75977KH via G58076ER
EdwardsLab

Molecular Weight

PermethylatedMW 3392.70866415 EdwardsLab
UnderivitizedMW 2733.97311086 EdwardsLab

Classification

GlycanSubtype N-linked complex, N-linked core-fucosylated Subsumption:G01354KL
GlycanType N-linked Subsumption:G01354KL

Monosaccharide Counts

FucCount 1 EdwardsLab
GalCount 3 EdwardsLab
GlcNAcCount 5 EdwardsLab
HexCount 6 EdwardsLab
HexNAcCount 5 EdwardsLab
ManCount 3 EdwardsLab
MonosaccharideCount 14 EdwardsLab
NeuAcCount 2 EdwardsLab
SiaCount 2 EdwardsLab
dHexCount 1 EdwardsLab

Cross Reference

GNOme G48789OQ GNOme
GlyTouCan G48789OQ GlyTouCan

Subsumption

Ancestor G01450UB, G11629QQ, G23028IO, G25569EP, G26302TI, G36798UJ, G38541LS, G44246UD, G49917IO, G52754KY, G57776ZS, G58076ER, G58848QS, G59699IB, G60282LL, G79939YZ, G85144OK GNOme
BaseComposition G25569EP GNOme
Composition G58076ER GNOme
Descendant G01354KL, G01543ZX, G03075ZE, G10228OD, G16150CJ, G18581LO, G31662BR, G37812PU, G38022PE, G42686NQ, G45661NA, G45720CA, G47280HM, G62765SF GNOme
FullyDetermined G01354KL, G03075ZE, G10228OD, G16150CJ, G18581LO, G31662BR, G38022PE, G42686NQ, G45720CA, G47280HM, G62765SF GNOme
Level Saccharide GNOme
MissingScore 513 GNOme
SubsumedBy G58848QS GNOme
Subsumes G01543ZX, G37812PU, G45661NA GNOme
Topology G44246UD GNOme

Glycan Structure

Composition false EdwardsLab
FullyDetermined false EdwardsLab
HasMonosaccharide Fuc, Gal, GlcNAc, Hex, HexNAc, Man, NeuAc, Sia, dHex EdwardsLab
HasRepeat false EdwardsLab
ReducingEnd GlcNAc, HexNAc EdwardsLab
UndeterminedTopology true EdwardsLab