G58232MG

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Sequence

GlycoCT

RES 1b:b-dglc-HEX-1:5 2s:n-acetyl 3b:b-dglc-HEX-1:5 4s:n-acetyl 5b:b-dman-HEX-1:5 6b:a-dman-HEX-1:5 7b:x-dglc-HEX-1:5 8b:x-dgal-HEX-1:5 9s:n-acetyl 10b:x-dglc-HEX-1:5 11b:x-dgal-HEX-1:5 12s:n-acetyl 13b:a-dman-HEX-1:5 14b:x-dglc-HEX-1:5 15b:x-dgal-HEX-1:5 16s:n-acetyl LIN 1:1d(2+1)2n 2:1o(4+1)3d 3:3d(2+1)4n 4:3o(4+1)5d 5:5o(3|6+1)6d 6:6o(-1+1)7d 7:7o(-1+1)8d 8:7d(2+1)9n 9:6o(-1+1)10d 10:10o(-1+1)11d 11:10d(2+1)12n 12:5o(3|6+1)13d 13:13o(-1+1)14d 14:14o(-1+1)15d 15:14d(2+1)16n UND UND1:100.0:100.0 ParentIDs:1|3|5|6|7|8|10|11|13|14|15 SubtreeLinkageID1:o(-1+2)d RES 17b:x-dgro-dgal-NON-2:6|1:a|2:keto|3:d 18s:n-acetyl LIN 16:17d(5+1)18n UND2:100.0:100.0 ParentIDs:1|3|5|6|7|8|10|11|13|14|15 SubtreeLinkageID1:o(-1+2)d RES 19b:x-dgro-dgal-NON-2:6|1:a|2:keto|3:d 20s:n-acetyl LIN 17:19d(5+1)20n UND3:100.0:100.0 ParentIDs:1|3|5|6|7|8|10|11|13|14|15 SubtreeLinkageID1:o(-1+1)d RES 21b:x-lgal-HEX-1:5|6:d

GlyTouCan
GlycoWorkBench

redEnd--?b?D-b-D-Glcp,p(--2NAc)--4b1D-b-D-Glcp,p(--2NAc)--4b1D-b-D-Manp,p(--3/6a1D-a-D-Manp,p(--??1D-?-D-Glcp,p(--2NAc)--??1D-?-D-Galp,p)--??1D-?-D-Glcp,p(--2NAc)--??1D-?-D-Galp,p)--3/6a1D-a-D-Manp,p--??1D-?-D-Glcp,p(--2NAc)--??1D-?-D-Galp,p}((--?D-?-D-Neup,p--5NAc)--?D-?-D-Neup,p--5NAc)--?L-?-L-Fucp,p$MONO,perMe,Na,0,redEnd

EdwardsLab
WURCS

WURCS=2.0/7,14,13/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5][a2122h-1x_1-5_2*NCC/3=O][a2112h-1x_1-5][Aad21122h-2x_2-6_5*NCC/3=O][a1221m-1x_1-5]/1-1-2-3-4-5-4-5-3-4-5-6-6-7/a4-b1_b4-c1_d1-c3|c6_i1-c3|c6_d?-e1_d?-g1_e?-f1_g?-h1_i?-j1_j?-k1_l2-a?|b?|c?|d?|e?|f?|g?|h?|i?|j?|k?}_m2-a?|b?|c?|d?|e?|f?|g?|h?|i?|j?|k?}_n1-a?|b?|c?|d?|e?|f?|g?|h?|i?|j?|k?}

GlyTouCan

Taxonomy

Taxonomy 9606 UniCarbKB:7718
Taxonomy 9606 UniCarbKB:7842
Taxonomy 9606 UniCarbKB:7879

Species

Human Evidence No N-linked Xyl and no NeuGc, Alt
UniCarbKB:7718 TaxID 9606
UniCarbKB:7842 TaxID 9606
UniCarbKB:7879 TaxID 9606
EdwardsLab
Mouse Evidence Composition closure of G58848QS via G58076ER
Composition closure of G64048GU via G58076ER
Composition closure of G75977KH via G58076ER
EdwardsLab

Molecular Weight

PermethylatedMW 3392.70866415 EdwardsLab
UnderivitizedMW 2733.97311086 EdwardsLab
UnderivitizedMW 2733.9731097 GlyTouCan

Classification

GlycanSubtype N-linked complex GlycoMotif:GGM.001004
GlycanSubtype N-linked core-fucosylated GlycoMotif:GGM.001024
GlycanSubtype N-linked arm-fucosylated GlycoMotif:GGM.001025
GlycanType N-linked GlycoMotif:GGM.001004

Monosaccharide Counts

FucCount 1 EdwardsLab
GalCount 3 EdwardsLab
GlcNAcCount 5 EdwardsLab
HexCount 6 EdwardsLab
HexNAcCount 5 EdwardsLab
ManCount 3 EdwardsLab
MonosaccharideCount 14 EdwardsLab
NeuAcCount 2 EdwardsLab
SiaCount 2 EdwardsLab
dHexCount 1 EdwardsLab
MonosaccharideCount 14 GlyTouCan

Cross Reference

GlyGen G58232MG EdwardsLab
GNOme G58232MG GNOme
GlyCosmos G58232MG GlyCosmos
GlyTouCan G58232MG GlyTouCan
UniCarbKB 7718, 7842, 7879 UniCarbKB

Publications

Publication 18214858 UniCarbKB:7718
Publication 18214858 UniCarbKB:7842
Publication 18214858 UniCarbKB:7879

Glycan Motif

ClassMotif GGM.001001, GGM.001004, GGM.001024, GGM.001025, GGM.001027 GlycoMotif
Motif GGM.000001, GGM.000005, GGM.000018, GGM.000020, GGM.000022, GGM.000024, GGM.000034 GlycoMotif
StrictClassMotif GGM.001027 GlycoMotif

Subsumption

Ancestor G11629QQ, G23028IO, G25569EP, G49917IO, G57776ZS, G58076ER, G59699IB, G74269EB, G85144OK GNOme
BaseComposition G25569EP GNOme
Composition G58076ER GNOme
Descendant G01354KL, G03075ZE, G07003AA, G10228OD, G12425WW, G14740XE, G16150CJ, G16529MG, G18581LO, G20919FV, G22208HN, G24857RT, G31662BR, G35740ZG, G36551EV, G38022PE, G39810GC, G42686NQ, G45720CA, G47280HM, G61575RT, G62765SF, G72580QS, G77451VF, G80537QW, G87489PB, G87519TU, G89641ZV, G91905FJ GNOme
FullyDetermined G01354KL, G03075ZE, G10228OD, G16150CJ, G16529MG, G18581LO, G31662BR, G38022PE, G42686NQ, G45720CA, G47280HM, G61575RT, G62765SF, G72580QS, G80537QW, G91905FJ GNOme
Level Saccharide GNOme
MissingScore 1329 GNOme
SubsumedBy G74269EB GNOme
Subsumes G07003AA, G22208HN, G36551EV, G87519TU GNOme

Glycan Structure

Composition false EdwardsLab
FullyDetermined false EdwardsLab
HasMonosaccharide Fuc, Gal, GlcNAc, Hex, HexNAc, Man, NeuAc, Sia, dHex EdwardsLab
HasRepeat false EdwardsLab
ReducingEnd GlcNAc, HexNAc EdwardsLab
UndeterminedTopology true EdwardsLab