G60282LL

From GlycanData
Jump to navigation Jump to search

Sequence

GlycoCT

RES 1b:x-dglc-HEX-1:5 2s:n-acetyl 3b:x-dglc-HEX-1:5 4s:n-acetyl 5b:x-dman-HEX-1:5 6b:x-dman-HEX-1:5 7b:x-HEX-x:x 8s:n-acetyl 9b:x-HEX-x:x 10b:x-HEX-x:x 11s:n-acetyl 12b:x-HEX-x:x 13b:x-dman-HEX-1:5 14b:x-HEX-x:x 15s:n-acetyl 16b:x-HEX-x:x 17b:x-lgal-HEX-1:5|6:d LIN 1:1d(2+1)2n 2:1o(-1+1)3d 3:3d(2+1)4n 4:3o(-1+1)5d 5:5o(-1+1)6d 6:6o(-1+1)7d 7:7d(2+1)8n 8:7o(-1+1)9d 9:6o(-1+1)10d 10:10d(2+1)11n 11:10o(-1+1)12d 12:5o(-1+1)13d 13:13o(-1+1)14d 14:14d(2+1)15n 15:14o(-1+1)16d 16:1o(-1+1)17d UND UND1:100.0:100.0 ParentIDs:1|3|5|6|7|9|10|12|13|14|16|17 SubtreeLinkageID1:o(-1+-1)d RES 18b:x-dgro-dgal-NON-2:6|1:a|2:keto|3:d 19s:n-acetyl LIN 17:18d(5+1)19n UND2:100.0:100.0 ParentIDs:1|3|5|6|7|9|10|12|13|14|16|17 SubtreeLinkageID1:o(-1+-1)d RES 20b:x-dgro-dgal-NON-2:6|1:a|2:keto|3:d 21s:n-acetyl LIN 18:20d(5+1)21n

GlyTouCan
WURCS

WURCS=2.0/6,14,13/[a2122h-1x_1-5_2*NCC/3=O][a1122h-1x_1-5][axxxxh-1x_1-?_2*NCC/3=O][axxxxh-1x_1-?][a1221m-1x_1-5][Aad21122h-2x_2-6_5*NCC/3=O]/1-1-2-2-3-4-3-4-2-3-4-5-6-6/a?-b1_a?-l1_b?-c1_c?-d1_c?-i1_d?-e1_d?-g1_e?-f1_g?-h1_i?-j1_j?-k1_m?-a?|b?|c?|d?|e?|f?|g?|h?|i?|j?|k?|l?}_n?-a?|b?|c?|d?|e?|f?|g?|h?|i?|j?|k?|l?}

GlyTouCan

Species

Human Evidence Subsumption of G01543ZX
Subsumption of G10228OD
Subsumption of G16150CJ
Subsumption of G16529MG
Subsumption of G21454AE
Subsumption of G22208HN
Subsumption of G25713RA
Subsumption of G37306TB
Subsumption of G38022PE
Subsumption of G42686NQ
Subsumption of G45661NA
Subsumption of G47961DI
Subsumption of G62765SF
Subsumption of G74239ZQ
Subsumption of G79939YZ
Subsumption of G80537QW
Subsumption of G91905FJ
Subsumption of G96916QO
EdwardsLab
Mouse Evidence Subsumption of G58848QS
Subsumption of G64048GU
Subsumption of G75977KH
EdwardsLab
Rat Evidence Subsumption of G52754KY EdwardsLab

Molecular Weight

PermethylatedMW 3392.70866415 EdwardsLab
UnderivitizedMW 2733.97311086 EdwardsLab
UnderivitizedMW 2733.9731097 GlyTouCan

Classification

GlycanSubtype N-linked core-fucosylated GlycoMotif:GGM.001024
GlycanType N-linked GlycoMotif:GGM.001024
GlycanSubtype N-linked complex Subsumption:G01354KL

Monosaccharide Counts

FucCount 1 EdwardsLab
GlcNAcCount 2 EdwardsLab
HexCount 6 EdwardsLab
HexNAcCount 5 EdwardsLab
ManCount 3 EdwardsLab
MonosaccharideCount 14 EdwardsLab
NeuAcCount 2 EdwardsLab
SiaCount 2 EdwardsLab
dHexCount 1 EdwardsLab
MonosaccharideCount 14 GlyTouCan

Cross Reference

GlyGen G60282LL EdwardsLab
GNOme G60282LL GNOme
GlyCosmos G60282LL GlyCosmos
GlyTouCan G60282LL GlyTouCan

Glycan Motif

ClassMotif GGM.001001, GGM.001024, GGM.001027 GlycoMotif
StrictClassMotif GGM.001027 GlycoMotif

Subsumption

Ancestor G25569EP, G57776ZS, G59699IB, G85144OK GNOme
BaseComposition G25569EP GNOme
Composition G59699IB GNOme
Descendant G01354KL, G01450UB, G01543ZX, G03075ZE, G05314WL, G07003AA, G10228OD, G10794HZ, G15730FJ, G16150CJ, G16529MG, G18581LO, G18724OW, G20919FV, G21454AE, G22208HN, G22427ZK, G25460BQ, G25713RA, G26302TI, G29419HY, G31662BR, G32510IZ, G36798UJ, G37306TB, G37812PU, G38022PE, G38541LS, G39810GC, G42060JY, G42686NQ, G44246UD, G44754IE, G45661NA, G45720CA, G47280HM, G47961DI, G48789OQ, G52754KY, G58025LK, G58571IP, G58848QS, G59345UT, G62765SF, G64048GU, G64936OS, G74239ZQ, G75977KH, G79939YZ, G80537QW, G81670RK, G84981PB, G87489PB, G91905FJ, G94737YG, G96916QO GNOme
FullyDetermined G01354KL, G03075ZE, G10228OD, G16150CJ, G16529MG, G18581LO, G31662BR, G38022PE, G42686NQ, G45720CA, G47280HM, G62765SF, G80537QW, G91905FJ GNOme
Level Topology GNOme
MissingScore 2283 GNOme
Saccharides G26302TI GNOme
SubsumedBy G59699IB GNOme
Subsumes G26302TI, G44246UD, G81670RK GNOme
Topology G60282LL GNOme

Glycan Structure

Composition false EdwardsLab
FullyDetermined false EdwardsLab
HasMonosaccharide Fuc, GlcNAc, Hex, HexNAc, Man, NeuAc, Sia, dHex EdwardsLab
HasRepeat false EdwardsLab
ReducingEnd GlcNAc, HexNAc EdwardsLab
UndeterminedTopology true EdwardsLab