G62232OO

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Sequence

GlycoCT

RES 1b:x-dglc-HEX-1:5 2s:n-acetyl 3b:b-dglc-HEX-1:5 4s:n-acetyl 5b:b-dman-HEX-1:5 6b:a-dman-HEX-1:5 7b:b-dglc-HEX-1:5 8s:n-acetyl 9b:b-dgal-HEX-1:5 10b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 11s:n-acetyl 12b:a-dman-HEX-1:5 13b:b-dglc-HEX-1:5 14s:n-acetyl 15b:b-dgal-HEX-1:5 16b:a-lgal-HEX-1:5|6:d LIN 1:1d(2+1)2n 2:1o(4+1)3d 3:3d(2+1)4n 4:3o(4+1)5d 5:5o(3+1)6d 6:6o(2+1)7d 7:7d(2+1)8n 8:7o(4+1)9d 9:9o(3|6+2)10d 10:10d(5+1)11n 11:5o(6+1)12d 12:12o(2+1)13d 13:13d(2+1)14n 14:13o(4+1)15d 15:1o(6+1)16d UND UND1:100.0:100.0 ParentIDs:6|12 SubtreeLinkageID1:o(4|6+1)d RES 17b:b-dglc-HEX-1:5 18s:n-acetyl 19b:b-dgal-HEX-1:5 20b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 21s:n-acetyl LIN 16:17d(2+1)18n 17:17o(4+1)19d 18:19o(3|6+2)20d 19:20d(5+1)21n

GlyTouCan
GlycoWorkBench

redEnd--?D-?-D-Glcp,p((--2NAc)--4b1D-b-D-Glcp,p(--2NAc)--4b1D-b-D-Manp,p(--3a1D-a-D-Manp,p--2b1D-b-D-Glcp,p(--2NAc)--4b1D-b-D-Galp,p--3/6a2D-a-D-Neup,p--5NAc)--6a1D-a-D-Manp,p--2b1D-b-D-Glcp,p(--2NAc)--4b1D-b-D-Galp,p)--6a1L-a-L-Fucp,p}--4/6b?D-b-D-Glcp,p(--2NAc)--4b1D-b-D-Galp,p--3/6a2D-a-D-Neup,p--5NAc$MONO,perMe,Na,0,redEnd

EdwardsLab
WURCS

WURCS=2.0/7,14,13/[a2122h-1x_1-5_2*NCC/3=O][a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5][a2112h-1b_1-5][Aad21122h-2a_2-6_5*NCC/3=O][a1221m-1a_1-5]/1-2-3-4-2-5-6-4-2-5-7-2-5-6/a4-b1_a6-k1_b4-c1_c3-d1_c6-h1_d2-e1_e4-f1_h2-i1_i4-j1_l4-m1_g2-f3|f6_n2-m3|m6_l1-d4|d6|h4|h6}

GlyTouCan

Species

Human Evidence Subsumption of G21454AE
Subsumption of G37306TB
Subsumption of G38022PE
Subsumption of G62765SF
Subsumption of G80537QW
EdwardsLab
Mouse Evidence Composition closure of G58848QS via G58076ER
Composition closure of G64048GU via G58076ER
Composition closure of G75977KH via G58076ER
EdwardsLab

Molecular Weight

PermethylatedMW 3392.70866415 EdwardsLab
UnderivitizedMW 2733.97311086 EdwardsLab
UnderivitizedMW 2733.9731097 GlyTouCan

Classification

GlycanSubtype N-linked core-fucosylated GlycoMotif:GGM.001024
GlycanSubtype N-linked complex GlycoMotif:GGM.001004
GlycanType N-linked GlycoMotif:GGM.001004

Monosaccharide Counts

FucCount 1 EdwardsLab
GalCount 3 EdwardsLab
GlcNAcCount 5 EdwardsLab
HexCount 6 EdwardsLab
HexNAcCount 5 EdwardsLab
ManCount 3 EdwardsLab
MonosaccharideCount 14 EdwardsLab
NeuAcCount 2 EdwardsLab
SiaCount 2 EdwardsLab
dHexCount 1 EdwardsLab
MonosaccharideCount 14 GlyTouCan

Cross Reference

GlyGen G62232OO EdwardsLab
GNOme G62232OO GNOme
GlyCosmos G62232OO GlyCosmos
CFG carbNlink_30742_A GlyTouCan
GlyTouCan G62232OO GlyTouCan
GlycomeDB 29693 GlyTouCan

Glycan Motif

ClassMotif GGM.001001, GGM.001004, GGM.001024, GGM.001027 GlycoMotif
Motif GGM.000001, GGM.000034 GlycoMotif
StrictClassMotif GGM.001001, GGM.001004, GGM.001024, GGM.001027 GlycoMotif
StrictMotif GGM.000001 GlycoMotif

Subsumption

Ancestor G11629QQ, G23028IO, G25569EP, G37626QS, G49917IO, G57776ZS, G58076ER, G59699IB, G85144OK GNOme
BaseComposition G25569EP GNOme
Composition G58076ER GNOme
Descendant G15730FJ, G18581LO, G21454AE, G32510IZ, G37306TB, G38022PE, G62765SF, G80537QW GNOme
FullyDetermined G18581LO, G38022PE, G62765SF, G80537QW GNOme
Level Saccharide GNOme
MissingScore 108 GNOme
SubsumedBy G37626QS GNOme
Subsumes G15730FJ, G18581LO, G21454AE, G32510IZ, G37306TB GNOme
Topology G37626QS GNOme

Glycan Structure

Composition false EdwardsLab
FullyDetermined false EdwardsLab
HasMonosaccharide Fuc, Gal, GlcNAc, Hex, HexNAc, Man, NeuAc, Sia, dHex EdwardsLab
HasRepeat false EdwardsLab
ReducingEnd GlcNAc, HexNAc EdwardsLab
UndeterminedTopology true EdwardsLab