G64048GU

From GlycanData
Jump to navigation Jump to search

Sequence

GlycoCT

RES 1b:x-dglc-HEX-1:5 2s:n-acetyl 3b:b-dglc-HEX-1:5 4s:n-acetyl 5b:b-dman-HEX-1:5 6b:a-dman-HEX-1:5 7b:b-dglc-HEX-1:5 8s:n-acetyl 9b:b-dgal-HEX-1:5 10b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 11s:n-acetyl 12b:b-dglc-HEX-1:5 13s:n-acetyl 14b:b-dgal-HEX-1:5 15b:a-dman-HEX-1:5 16b:b-dglc-HEX-1:5 17s:n-acetyl 18b:b-dgal-HEX-1:5 19b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 20s:n-acetyl 21b:a-lgal-HEX-1:5|6:d LIN 1:1d(2+1)2n 2:1o(4+1)3d 3:3d(2+1)4n 4:3o(4+1)5d 5:5o(3+1)6d 6:6o(2+1)7d 7:7d(2+1)8n 8:7o(4+1)9d 9:9o(6+2)10d 10:10d(5+1)11n 11:6o(4+1)12d 12:12d(2+1)13n 13:12o(4+1)14d 14:5o(6+1)15d 15:15o(2+1)16d 16:16d(2+1)17n 17:16o(4+1)18d 18:18o(6+2)19d 19:19d(5+1)20n 20:1o(6+1)21d

GlyTouCan
GlycoWorkBench

redEnd--?D-?-D-Glcp,p((--2NAc)--4b1D-b-D-Glcp,p(--2NAc)--4b1D-b-D-Manp,p(--3a1D-a-D-Manp,p(--2b1D-b-D-Glcp,p(--2NAc)--4b1D-b-D-Galp,p--6a2D-a-D-Neup,p--5NAc)--4b1D-b-D-Glcp,p(--2NAc)--4b1D-b-D-Galp,p)--6a1D-a-D-Manp,p--2b1D-b-D-Glcp,p(--2NAc)--4b1D-b-D-Galp,p--6a2D-a-D-Neup,p--5NAc)--6a1L-a-L-Fucp,p$MONO,perMe,Na,0,redEnd

EdwardsLab
IUPAC

alpha-D-Neup5Ac-(2->6)-beta-D-Galp-(1->4)-beta-D-GlcpNAc-(1->2)[beta-D-Galp-(1->4)-beta-D-GlcpNAc-(1->4)]-alpha-D-Manp-(1->3)[alpha-D-Neup5Ac-(2->6)-beta-D-Galp-(1->4)-beta-D-GlcpNAc-(1->2)-alpha-D-Manp-(1->6)]-beta-D-Manp-(1->4)-beta-D-GlcpNAc-(1->4)[alpha-L-Fucp-(1->6)]-?-D-GlcpNAc-(1->

EdwardsLab
IUPAC

alpha-D-Neup5Ac-(2->6)-beta-D-Galp-(1->4)-beta-D-GlcpNAc-(1->2)[beta-D-Galp-(1->4)-beta-D-GlcpNAc-(1->4)]-alpha-D-Manp-(1->3)[alpha-D-Neup5Ac-(2->6)-beta-D-Galp-(1->4)-beta-D-GlcpNAc-(1->2)-alpha-D-Manp-(1->6)]-beta-D-Manp-(1->4)-beta-D-GlcpNAc-(1->4)[alpha-L-Fucp-(1->6)]-?-D-GlcpNAc-(1->

GlyCosmos
WURCS

WURCS=2.0/7,14,13/[a2122h-1x_1-5_2*NCC/3=O][a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5][a2112h-1b_1-5][Aad21122h-2a_2-6_5*NCC/3=O][a1221m-1a_1-5]/1-2-3-4-2-5-6-2-5-4-2-5-6-7/a4-b1_a6-n1_b4-c1_c3-d1_c6-j1_d2-e1_d4-h1_e4-f1_f6-g2_h4-i1_j2-k1_k4-l1_l6-m2

GlyTouCan

Taxonomy

Taxonomy 10090 GlyTouCan:G64048GU

Species

Human Evidence Composition closure of G00553AN via G58076ER
Composition closure of G00800WJ via G58076ER
Composition closure of G01543ZX via G58076ER
Composition closure of G06215XQ via G58076ER
Composition closure of G10228OD via G58076ER
Composition closure of G16150CJ via G58076ER
Composition closure of G16529MG via G58076ER
Composition closure of G21454AE via G58076ER
Composition closure of G22208HN via G58076ER
Composition closure of G25713RA via G58076ER
Composition closure of G31341PC via G58076ER
Composition closure of G37306TB via G58076ER
Composition closure of G38022PE via G58076ER
Composition closure of G41929NX via G58076ER
Composition closure of G42686NQ via G58076ER
Composition closure of G45661NA via G58076ER
Composition closure of G47961DI via G58076ER
Composition closure of G58232MG via G58076ER
Composition closure of G61575RT via G58076ER
Composition closure of G62765SF via G58076ER
Composition closure of G72356VO via G58076ER
Composition closure of G72580QS via G58076ER
Composition closure of G74239ZQ via G58076ER
Composition closure of G79939YZ via G58076ER
Composition closure of G80537QW via G58076ER
Composition closure of G91905FJ via G58076ER
Composition closure of G96503EZ via G58076ER
Composition closure of G96916QO via G58076ER
Composition closure of G97123TW via G58076ER
EdwardsLab
Mouse Evidence GlyTouCan:G64048GU TaxID 10090
No N-linked Xyl and no Alt
EdwardsLab

Molecular Weight

PermethylatedMW 3392.70866415 EdwardsLab
UnderivitizedMW 2733.97311086 EdwardsLab
UnderivitizedMW 2733.9731097 GlyTouCan

Classification

GlycanSubtype N-linked complex GlycoMotif:GGM.001004
GlycanSubtype N-linked core-fucosylated GlycoMotif:GGM.001024
GlycanType N-linked GlycoMotif:GGM.001004

Monosaccharide Counts

FucCount 1 EdwardsLab
GalCount 3 EdwardsLab
GlcNAcCount 5 EdwardsLab
HexCount 6 EdwardsLab
HexNAcCount 5 EdwardsLab
ManCount 3 EdwardsLab
MonosaccharideCount 14 EdwardsLab
NeuAcCount 2 EdwardsLab
SiaCount 2 EdwardsLab
dHexCount 1 EdwardsLab
MonosaccharideCount 14 GlyTouCan

Cross Reference

GlyGen G64048GU EdwardsLab
GNOme G64048GU GNOme
GlyCosmos G64048GU GlyCosmos
CFG carbNlink_40763_D000 GlyTouCan
GlyTouCan G64048GU GlyTouCan
GlycomeDB 32242 GlyTouCan
PubChem CID91858788, SID252292262 GlyTouCan

Glycan Motif

ClassMotif GGM.001001, GGM.001004, GGM.001024, GGM.001027 GlycoMotif
Motif GGM.000001 GlycoMotif
StrictClassMotif GGM.001001, GGM.001004, GGM.001024, GGM.001027 GlycoMotif
StrictMotif GGM.000001 GlycoMotif

Subsumption

Ancestor G05314WL, G10159DR, G11629QQ, G15212GE, G23028IO, G25569EP, G26302TI, G26985YI, G37626QS, G38541LS, G44246UD, G49917IO, G57776ZS, G58076ER, G59699IB, G60282LL, G74269EB, G81604RU, G81670RK, G85144OK, G94571WF GNOme
BaseComposition G25569EP GNOme
Composition G58076ER GNOme
Descendant G45720CA GNOme
FullyDetermined G45720CA GNOme
Level Saccharide GNOme
MissingScore 49 GNOme
SubsumedBy G05314WL, G26985YI, G38541LS GNOme
Subsumes G45720CA GNOme
Topology G05314WL GNOme

Glycan Structure

Composition false EdwardsLab
FullyDetermined true EdwardsLab
HasMonosaccharide Fuc, Gal, GlcNAc, Hex, HexNAc, Man, NeuAc, Sia, dHex EdwardsLab
HasRepeat false EdwardsLab
ReducingEnd GlcNAc, HexNAc EdwardsLab
UndeterminedTopology false EdwardsLab