G68560MK

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Sequence

GlycoCT

RES 1b:b-dglc-HEX-1:5 2s:n-acetyl 3b:b-dglc-HEX-1:5 4s:n-acetyl 5b:b-dman-HEX-1:5 6b:a-dman-HEX-1:5 7b:b-dglc-HEX-1:5 8s:n-acetyl 9b:a-dman-HEX-1:5 10b:b-dglc-HEX-1:5 11s:n-acetyl 12b:a-lgal-HEX-1:5|6:d LIN 1:1d(2+1)2n 2:1o(4+1)3d 3:3d(2+1)4n 4:3o(4+1)5d 5:5o(3+1)6d 6:6o(2+1)7d 7:7d(2+1)8n 8:5o(6+1)9d 9:9o(2+1)10d 10:10d(2+1)11n 11:1o(6+1)12d UND UND1:100.0:100.0 ParentIDs:1|3|5|6|7|9|10|12 SubtreeLinkageID1:o(-1+-1)d RES 13b:x-HEX-1:5 14s:n-acetyl LIN 12:13d(2+1)14n UND2:100.0:100.0 ParentIDs:1|3|5|6|7|9|10|12 SubtreeLinkageID1:o(-1+-1)d RES 15b:x-HEX-1:5 16s:n-acetyl LIN 13:15d(2+1)16n UND3:100.0:100.0 ParentIDs:1|3|5|6|7|9|10|12 SubtreeLinkageID1:o(-1+-1)d RES 17b:x-HEX-1:5 18s:n-acetyl LIN 14:17d(2+1)18n

GlyTouCan
GlycoWorkBench

redEnd--?b?D-b-D-Glcp,p((--2NAc)--4b1D-b-D-Glcp,p(--2NAc)--4b1D-b-D-Manp,p(--3a1D-a-D-Manp,p--2b1D-b-D-Glcp,p--2NAc)--6a1D-a-D-Manp,p--2b1D-b-D-Glcp,p--2NAc)--6a1L-a-L-Fucp,p}((--??-Hexp,p--2NAc)--??-Hexp,p--2NAc)--??-Hexp,p--2NAc$MONO,perMe,Na,0,redEnd

EdwardsLab
WURCS

WURCS=2.0/5,11,10/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5][a1221m-1a_1-5][axxxxh-1x_1-5_2*NCC/3=O]/1-1-2-3-1-3-1-4-5-5-5/a4-b1_a6-h1_b4-c1_c3-d1_c6-f1_d2-e1_f2-g1_i?-a?|b?|c?|d?|e?|f?|g?|h?}_j?-a?|b?|c?|d?|e?|f?|g?|h?}_k?-a?|b?|c?|d?|e?|f?|g?|h?}

GlyTouCan

Species

Human Evidence Subsumption of G00463XD
Subsumption of G59361OW
EdwardsLab

Molecular Weight

PermethylatedMW 2548.31465468 EdwardsLab
UnderivitizedMW 2071.78255231 EdwardsLab
UnderivitizedMW 2071.7825514 GlyTouCan

Classification

GlycanSubtype N-linked complex GlycoMotif:GGM.001004
GlycanSubtype N-linked core-fucosylated GlycoMotif:GGM.001024
GlycanType N-linked GlycoMotif:GGM.001004
GlycanSubtype N-linked bisected Subsumption:G00463XD

Monosaccharide Counts

FucCount 1 EdwardsLab
GlcNAcCount 4 EdwardsLab
HexCount 3 EdwardsLab
HexNAcCount 7 EdwardsLab
ManCount 3 EdwardsLab
MonosaccharideCount 11 EdwardsLab
dHexCount 1 EdwardsLab
MonosaccharideCount 11 GlyTouCan

Cross Reference

GlyGen G68560MK EdwardsLab
GNOme G68560MK GNOme
GlyCosmos G68560MK GlyCosmos
GlyConnectStructure 532 GlyTouCan
GlyTouCan G68560MK GlyTouCan

Glycan Motif

ClassMotif GGM.001001, GGM.001004, GGM.001024, GGM.001027 GlycoMotif
StrictClassMotif GGM.001001, GGM.001004, GGM.001024, GGM.001027 GlycoMotif

Subsumption

Ancestor G24528MX, G32332VU, G54278KA, G67367OT, G90083OQ, G91034CB, G97100SS GNOme
BaseComposition G67367OT GNOme
Composition G91034CB GNOme
Descendant G00463XD, G12061IK, G40358EZ, G59361OW GNOme
FullyDetermined G00463XD, G12061IK, G40358EZ, G59361OW GNOme
Level Saccharide GNOme
MissingScore 1442 GNOme
SubsumedBy G90083OQ GNOme
Subsumes G00463XD, G12061IK, G40358EZ, G59361OW GNOme

Glycan Structure

Composition false EdwardsLab
FullyDetermined false EdwardsLab
HasMonosaccharide Fuc, GlcNAc, Hex, HexNAc, Man, dHex EdwardsLab
HasRepeat false EdwardsLab
ReducingEnd GlcNAc, HexNAc EdwardsLab
UndeterminedTopology true EdwardsLab