G72356VO

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Sequence

GlycoCT

RES 1b:x-dglc-HEX-1:5 2s:n-acetyl 3b:b-dglc-HEX-1:5 4s:n-acetyl 5b:b-dman-HEX-1:5 6b:a-dman-HEX-1:5 7b:b-dglc-HEX-1:5 8s:n-acetyl 9b:b-dgal-HEX-1:5 10b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 11s:n-acetyl 12b:b-dglc-HEX-1:5 13s:n-acetyl 14b:a-lgal-HEX-1:5|6:d 15b:b-dgal-HEX-1:5 16b:a-dman-HEX-1:5 17b:b-dglc-HEX-1:5 18s:n-acetyl 19b:b-dgal-HEX-1:5 20b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 21s:n-acetyl LIN 1:1d(2+1)2n 2:1o(4+1)3d 3:3d(2+1)4n 4:3o(4+1)5d 5:5o(3+1)6d 6:6o(2+1)7d 7:7d(2+1)8n 8:7o(4+1)9d 9:9o(6+2)10d 10:10d(5+1)11n 11:6o(4+1)12d 12:12d(2+1)13n 13:12o(3+1)14d 14:12o(4+1)15d 15:5o(6+1)16d 16:16o(2+1)17d 17:17d(2+1)18n 18:17o(4+1)19d 19:19o(6+2)20d 20:20d(5+1)21n

GlyTouCan
GlycoWorkBench

redEnd--?D-?-D-Glcp,p(--2NAc)--4b1D-b-D-Glcp,p(--2NAc)--4b1D-b-D-Manp,p(--3a1D-a-D-Manp,p(--2b1D-b-D-Glcp,p(--2NAc)--4b1D-b-D-Galp,p--6a2D-a-D-Neup,p--5NAc)--4b1D-b-D-Glcp,p((--2NAc)--3a1L-a-L-Fucp,p)--4b1D-b-D-Galp,p)--6a1D-a-D-Manp,p--2b1D-b-D-Glcp,p(--2NAc)--4b1D-b-D-Galp,p--6a2D-a-D-Neup,p--5NAc$MONO,perMe,Na,0,redEnd

EdwardsLab
IUPAC

alpha-D-Neup5Ac-(2->6)-beta-D-Galp-(1->4)-beta-D-GlcpNAc-(1->2)[beta-D-Galp-(1->4)[alpha-L-Fucp-(1->3)]-beta-D-GlcpNAc-(1->4)]-alpha-D-Manp-(1->3)[alpha-D-Neup5Ac-(2->6)-beta-D-Galp-(1->4)-beta-D-GlcpNAc-(1->2)-alpha-D-Manp-(1->6)]-beta-D-Manp-(1->4)-beta-D-GlcpNAc-(1->4)-?-D-GlcpNAc-(1->

EdwardsLab
IUPAC

alpha-D-Neup5Ac-(2->6)-beta-D-Galp-(1->4)-beta-D-GlcpNAc-(1->2)[beta-D-Galp-(1->4)[alpha-L-Fucp-(1->3)]-beta-D-GlcpNAc-(1->4)]-alpha-D-Manp-(1->3)[alpha-D-Neup5Ac-(2->6)-beta-D-Galp-(1->4)-beta-D-GlcpNAc-(1->2)-alpha-D-Manp-(1->6)]-beta-D-Manp-(1->4)-beta-D-GlcpNAc-(1->4)-?-D-GlcpNAc-(1->

GlyCosmos
WURCS

WURCS=2.0/7,14,13/[a2122h-1x_1-5_2*NCC/3=O][a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5][a2112h-1b_1-5][Aad21122h-2a_2-6_5*NCC/3=O][a1221m-1a_1-5]/1-2-3-4-2-5-6-2-7-5-4-2-5-6/a4-b1_b4-c1_c3-d1_c6-k1_d2-e1_d4-h1_e4-f1_f6-g2_h3-i1_h4-j1_k2-l1_l4-m1_m6-n2

GlyTouCan

Taxonomy

Taxonomy 9606, 32644 GlyTouCan:G72356VO

Species

Human Evidence GlyTouCan:G72356VO TaxID 9606
No N-linked Xyl and no NeuGc, Alt
EdwardsLab
Mouse Evidence Composition closure of G58848QS via G58076ER
Composition closure of G64048GU via G58076ER
Composition closure of G75977KH via G58076ER
EdwardsLab

Molecular Weight

PermethylatedMW 3392.70866415 EdwardsLab
UnderivitizedMW 2733.97311086 EdwardsLab
UnderivitizedMW 2733.9731097 GlyTouCan

Classification

GlycanSubtype N-linked complex GlycoMotif:GGM.001004
GlycanSubtype N-linked arm-fucosylated GlycoMotif:GGM.001025
GlycanType N-linked GlycoMotif:GGM.001004

Monosaccharide Counts

FucCount 1 EdwardsLab
GalCount 3 EdwardsLab
GlcNAcCount 5 EdwardsLab
HexCount 6 EdwardsLab
HexNAcCount 5 EdwardsLab
ManCount 3 EdwardsLab
MonosaccharideCount 14 EdwardsLab
NeuAcCount 2 EdwardsLab
SiaCount 2 EdwardsLab
dHexCount 1 EdwardsLab
MonosaccharideCount 14 GlyTouCan

Cross Reference

GlyGen G72356VO EdwardsLab
GNOme G72356VO GNOme
GlyCosmos G72356VO GlyCosmos
CFG carbNlink_40051_D000 GlyTouCan
GlyTouCan G72356VO GlyTouCan
GlycomeDB 21227 GlyTouCan
KEGG G06009 GlyTouCan
PubChem CID71297873, SID252286949 GlyTouCan

Glycan Motif

ClassMotif GGM.001001, GGM.001004, GGM.001025, GGM.001027 GlycoMotif
Motif GGM.000001, GGM.000018 GlycoMotif
StrictClassMotif GGM.001001, GGM.001004, GGM.001025, GGM.001027 GlycoMotif
StrictMotif GGM.000001, GGM.000018 GlycoMotif

Subsumption

Ancestor G11629QQ, G23028IO, G25569EP, G26985YI, G29454KU, G43192WZ, G46668VT, G49917IO, G57776ZS, G58076ER, G59699IB, G74269EB, G85144OK, G89704JD GNOme
BaseComposition G25569EP GNOme
Composition G58076ER GNOme
Descendant G72580QS GNOme
FullyDetermined G72580QS GNOme
Level Saccharide GNOme
MissingScore 49 GNOme
SubsumedBy G26985YI, G43192WZ GNOme
Subsumes G72580QS GNOme
Topology G43192WZ GNOme

Glycan Structure

Composition false EdwardsLab
FullyDetermined true EdwardsLab
HasMonosaccharide Fuc, Gal, GlcNAc, Hex, HexNAc, Man, NeuAc, Sia, dHex EdwardsLab
HasRepeat false EdwardsLab
ReducingEnd GlcNAc, HexNAc EdwardsLab
UndeterminedTopology false EdwardsLab