G72580QS

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Sequence

GLYCAM-IUPAC

DNeup5Aca2-6DGalpb1-4DGlcpNAcb1-2[DGalpb1-4[LFucpa1-3]DGlcpNAcb1-4]DManpa1-3[DNeup5Aca2-6DGalpb1-4DGlcpNAcb1-2DManpa1-6]DManpb1-4DGlcpNAcb1-4DGlcpNAcb1-OH

EdwardsLab
GlycoCT

RES 1b:b-dglc-HEX-1:5 2s:n-acetyl 3b:b-dglc-HEX-1:5 4s:n-acetyl 5b:b-dman-HEX-1:5 6b:a-dman-HEX-1:5 7b:b-dglc-HEX-1:5 8s:n-acetyl 9b:b-dgal-HEX-1:5 10b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 11s:n-acetyl 12b:b-dglc-HEX-1:5 13s:n-acetyl 14b:a-lgal-HEX-1:5|6:d 15b:b-dgal-HEX-1:5 16b:a-dman-HEX-1:5 17b:b-dglc-HEX-1:5 18s:n-acetyl 19b:b-dgal-HEX-1:5 20b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 21s:n-acetyl LIN 1:1d(2+1)2n 2:1o(4+1)3d 3:3d(2+1)4n 4:3o(4+1)5d 5:5o(3+1)6d 6:6o(2+1)7d 7:7d(2+1)8n 8:7o(4+1)9d 9:9o(6+2)10d 10:10d(5+1)11n 11:6o(4+1)12d 12:12d(2+1)13n 13:12o(3+1)14d 14:12o(4+1)15d 15:5o(6+1)16d 16:16o(2+1)17d 17:17d(2+1)18n 18:17o(4+1)19d 19:19o(6+2)20d 20:20d(5+1)21n

GlyTouCan
GlycoWorkBench

redEnd--?b?D-b-D-Glcp,p(--2NAc)--4b1D-b-D-Glcp,p(--2NAc)--4b1D-b-D-Manp,p(--3a1D-a-D-Manp,p(--2b1D-b-D-Glcp,p(--2NAc)--4b1D-b-D-Galp,p--6a2D-a-D-Neup,p--5NAc)--4b1D-b-D-Glcp,p((--2NAc)--3a1L-a-L-Fucp,p)--4b1D-b-D-Galp,p)--6a1D-a-D-Manp,p--2b1D-b-D-Glcp,p(--2NAc)--4b1D-b-D-Galp,p--6a2D-a-D-Neup,p--5NAc$MONO,perMe,Na,0,redEnd

EdwardsLab
IUPAC

alpha-D-Neup5Ac-(2->6)-beta-D-Galp-(1->4)-beta-D-GlcpNAc-(1->2)[beta-D-Galp-(1->4)[alpha-L-Fucp-(1->3)]-beta-D-GlcpNAc-(1->4)]-alpha-D-Manp-(1->3)[alpha-D-Neup5Ac-(2->6)-beta-D-Galp-(1->4)-beta-D-GlcpNAc-(1->2)-alpha-D-Manp-(1->6)]-beta-D-Manp-(1->4)-beta-D-GlcpNAc-(1->4)-beta-D-GlcpNAc-(1->

EdwardsLab
IUPAC

alpha-D-Neup5Ac-(2->6)-beta-D-Galp-(1->4)-beta-D-GlcpNAc-(1->2)[beta-D-Galp-(1->4)[alpha-L-Fucp-(1->3)]-beta-D-GlcpNAc-(1->4)]-alpha-D-Manp-(1->3)[alpha-D-Neup5Ac-(2->6)-beta-D-Galp-(1->4)-beta-D-GlcpNAc-(1->2)-alpha-D-Manp-(1->6)]-beta-D-Manp-(1->4)-beta-D-GlcpNAc-(1->4)-beta-D-GlcpNAc-(1->

GlyCosmos
WURCS

WURCS=2.0/6,14,13/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5][a2112h-1b_1-5][Aad21122h-2a_2-6_5*NCC/3=O][a1221m-1a_1-5]/1-1-2-3-1-4-5-1-6-4-3-1-4-5/a4-b1_b4-c1_c3-d1_c6-k1_d2-e1_d4-h1_e4-f1_f6-g2_h3-i1_h4-j1_k2-l1_l4-m1_m6-n2

GlyTouCan

Taxonomy

Taxonomy 9606 GlyConnectStructure:2049
Taxonomy 9606 GlyTouCan:G72580QS
Taxonomy 9606 UniCarbKB:4924

Species

Human Evidence GlyConnectStructure:2049 TaxID 9606
GlyTouCan:G72580QS TaxID 9606
No N-linked Xyl and no NeuGc, Alt
UniCarbKB:4924 TaxID 9606
EdwardsLab
Mouse Evidence Composition closure of G58848QS via G58076ER
Composition closure of G64048GU via G58076ER
Composition closure of G75977KH via G58076ER
EdwardsLab

Molecular Weight

PermethylatedMW 3392.70866415 EdwardsLab
UnderivitizedMW 2733.97311086 EdwardsLab
UnderivitizedMW 2733.9731097 GlyTouCan

Classification

GlycanSubtype N-linked complex GlycoMotif:GGM.001004
GlycanSubtype N-linked arm-fucosylated GlycoMotif:GGM.001025
GlycanType N-linked GlycoMotif:GGM.001004

Monosaccharide Counts

FucCount 1 EdwardsLab
GalCount 3 EdwardsLab
GlcNAcCount 5 EdwardsLab
HexCount 6 EdwardsLab
HexNAcCount 5 EdwardsLab
ManCount 3 EdwardsLab
MonosaccharideCount 14 EdwardsLab
NeuAcCount 2 EdwardsLab
SiaCount 2 EdwardsLab
dHexCount 1 EdwardsLab
MonosaccharideCount 14 GlyTouCan

Cross Reference

GlyGen G72580QS EdwardsLab
GNOme G72580QS GNOme
GlyCosmos G72580QS GlyCosmos
Carbbank(CCSB) 2068, 2110, 20893 GlyTouCan
GLYCOSCIENCES.de 279, 22993 GlyTouCan
GlyConnectStructure 2049 GlyTouCan
GlyTouCan G72580QS GlyTouCan
GlycomeDB 226 GlyTouCan
KEGG G01932 GlyTouCan
PubChem CID91858184, SID252291529 GlyTouCan
GlycO GOG14 GlycomeDB
UniCarbKB 4924 UniCarbKB

Publications

Publication 7096333, 7451505 UniCarbKB:4924

Glycan Motif

ClassMotif GGM.001001, GGM.001004, GGM.001025, GGM.001027 GlycoMotif
Motif GGM.000001, GGM.000018 GlycoMotif
StrictClassMotif GGM.001001, GGM.001004, GGM.001025, GGM.001027 GlycoMotif
StrictMotif GGM.000001, GGM.000018 GlycoMotif

Subsumption

Ancestor G06215XQ, G11629QQ, G23028IO, G24857RT, G25569EP, G26985YI, G29454KU, G41929NX, G43192WZ, G46668VT, G49917IO, G57776ZS, G58076ER, G58232MG, G59699IB, G72356VO, G74269EB, G75490BT, G85144OK, G87519TU, G89425XZ, G89704JD GNOme
BaseComposition G25569EP GNOme
Composition G58076ER GNOme
Level Saccharide GNOme
MissingScore 0 GNOme
SubsumedBy G06215XQ, G24857RT, G72356VO, G75490BT, G89425XZ GNOme
Topology G43192WZ GNOme

Glycan Structure

Composition false EdwardsLab
FullyDetermined true EdwardsLab
HasMonosaccharide Fuc, Gal, GlcNAc, Hex, HexNAc, Man, NeuAc, Sia, dHex EdwardsLab
HasRepeat false EdwardsLab
ReducingEnd GlcNAc, HexNAc EdwardsLab
UndeterminedTopology false EdwardsLab