G79939YZ

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Sequence

GlycoCT

RES 1b:b-dglc-HEX-1:5 2s:n-acetyl 3b:b-dglc-HEX-1:5 4s:n-acetyl 5b:b-dman-HEX-1:5 6b:a-dman-HEX-1:5 7b:x-dglc-HEX-1:5 8b:x-dgal-HEX-1:5 9s:n-acetyl 10b:x-dglc-HEX-1:5 11b:x-dgal-HEX-1:5 12s:n-acetyl 13b:a-dman-HEX-1:5 14b:x-dglc-HEX-1:5 15b:x-dgal-HEX-1:5 16s:n-acetyl 17b:a-lgal-HEX-1:5|6:d LIN 1:1d(2+1)2n 2:1o(4+1)3d 3:3d(2+1)4n 4:3o(4+1)5d 5:5o(3|6+1)6d 6:6o(-1+1)7d 7:7o(-1+1)8d 8:7d(2+1)9n 9:6o(-1+1)10d 10:10o(-1+1)11d 11:10d(2+1)12n 12:5o(3|6+1)13d 13:13o(-1+1)14d 14:14o(-1+1)15d 15:14d(2+1)16n 16:1o(6+1)17d UND UND1:100.0:100.0 ParentIDs:1|3|5|6|7|8|10|11|13|14|15|17 SubtreeLinkageID1:o(-1+2)d RES 18b:x-dgro-dgal-NON-2:6|1:a|2:keto|3:d 19s:n-acetyl LIN 17:18d(5+1)19n UND2:100.0:100.0 ParentIDs:1|3|5|6|7|8|10|11|13|14|15|17 SubtreeLinkageID1:o(-1+2)d RES 20b:x-dgro-dgal-NON-2:6|1:a|2:keto|3:d 21s:n-acetyl LIN 18:20d(5+1)21n

GlyTouCan
GlycoWorkBench

redEnd--?b?D-b-D-Glcp,p((--2NAc)--4b1D-b-D-Glcp,p(--2NAc)--4b1D-b-D-Manp,p(--3/6a1D-a-D-Manp,p(--??1D-?-D-Glcp,p(--2NAc)--??1D-?-D-Galp,p)--??1D-?-D-Glcp,p(--2NAc)--??1D-?-D-Galp,p)--3/6a1D-a-D-Manp,p--??1D-?-D-Glcp,p(--2NAc)--??1D-?-D-Galp,p)--6a1L-a-L-Fucp,p}(--?D-?-D-Neup,p--5NAc)--?D-?-D-Neup,p--5NAc$MONO,perMe,Na,0,redEnd

EdwardsLab
WURCS

WURCS=2.0/7,14,13/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5][a2122h-1x_1-5_2*NCC/3=O][a2112h-1x_1-5][a1221m-1a_1-5][Aad21122h-2x_2-6_5*NCC/3=O]/1-1-2-3-4-5-4-5-3-4-5-6-7-7/a4-b1_a6-l1_b4-c1_d1-c3|c6_i1-c3|c6_d?-e1_d?-g1_e?-f1_g?-h1_i?-j1_j?-k1_m2-a?|b?|c?|d?|e?|f?|g?|h?|i?|j?|k?|l?}_n2-a?|b?|c?|d?|e?|f?|g?|h?|i?|j?|k?|l?}

GlyTouCan

Taxonomy

Taxonomy 9606 UniCarbKB:7501

Species

Human Evidence No N-linked Xyl and no NeuGc, Alt
UniCarbKB:7501 TaxID 9606
EdwardsLab
Mouse Evidence Subsumption of G58848QS
Subsumption of G75977KH
EdwardsLab

Molecular Weight

PermethylatedMW 3392.70866415 EdwardsLab
UnderivitizedMW 2733.97311086 EdwardsLab
UnderivitizedMW 2733.9731097 GlyTouCan

Classification

GlycanSubtype N-linked complex GlycoMotif:GGM.001004
GlycanSubtype N-linked core-fucosylated GlycoMotif:GGM.001024
GlycanType N-linked GlycoMotif:GGM.001004

Monosaccharide Counts

FucCount 1 EdwardsLab
GalCount 3 EdwardsLab
GlcNAcCount 5 EdwardsLab
HexCount 6 EdwardsLab
HexNAcCount 5 EdwardsLab
ManCount 3 EdwardsLab
MonosaccharideCount 14 EdwardsLab
NeuAcCount 2 EdwardsLab
SiaCount 2 EdwardsLab
dHexCount 1 EdwardsLab
MonosaccharideCount 14 GlyTouCan

Cross Reference

GlyGen G79939YZ EdwardsLab
GNOme G79939YZ GNOme
GlyCosmos G79939YZ GlyCosmos
GlyTouCan G79939YZ GlyTouCan
UniCarbKB 7501 UniCarbKB

Publications

Publication 19343721 UniCarbKB:7501

Glycan Motif

ClassMotif GGM.001001, GGM.001004, GGM.001024, GGM.001027 GlycoMotif
Motif GGM.000001, GGM.000005, GGM.000034 GlycoMotif
StrictClassMotif GGM.001027 GlycoMotif

Subsumption

Ancestor G11629QQ, G23028IO, G25569EP, G26302TI, G36798UJ, G38541LS, G44246UD, G49917IO, G52754KY, G57776ZS, G58076ER, G59699IB, G60282LL, G85144OK GNOme
BaseComposition G25569EP GNOme
Composition G58076ER GNOme
Descendant G01354KL, G01450UB, G01543ZX, G03075ZE, G07003AA, G10228OD, G16150CJ, G16529MG, G18581LO, G20919FV, G22208HN, G31662BR, G37812PU, G38022PE, G39810GC, G42686NQ, G45661NA, G45720CA, G47280HM, G48789OQ, G58848QS, G62765SF, G74239ZQ, G75977KH, G80537QW, G87489PB, G91905FJ GNOme
FullyDetermined G01354KL, G03075ZE, G10228OD, G16150CJ, G16529MG, G18581LO, G31662BR, G38022PE, G42686NQ, G45720CA, G47280HM, G62765SF, G80537QW, G91905FJ GNOme
Level Saccharide GNOme
MissingScore 1085 GNOme
SubsumedBy G36798UJ, G52754KY GNOme
Subsumes G01450UB, G07003AA, G22208HN, G75977KH GNOme
Topology G44246UD GNOme

Glycan Structure

Composition false EdwardsLab
FullyDetermined false EdwardsLab
HasMonosaccharide Fuc, Gal, GlcNAc, Hex, HexNAc, Man, NeuAc, Sia, dHex EdwardsLab
HasRepeat false EdwardsLab
ReducingEnd GlcNAc, HexNAc EdwardsLab
UndeterminedTopology true EdwardsLab