G91905FJ

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Sequence

GLYCAM-IUPAC

DNeup5Aca2-3DGalpb1-4DGlcpNAcb1-2[DGalpb1-4DGlcpNAcb1-6]DManpa1-6[DNeup5Aca2-3DGalpb1-4DGlcpNAcb1-2DManpa1-3]DManpb1-4DGlcpNAcb1-4[LFucpa1-6]DGlcpNAcb1-OH

EdwardsLab
GlycoCT

RES 1b:b-dglc-HEX-1:5 2s:n-acetyl 3b:b-dglc-HEX-1:5 4s:n-acetyl 5b:b-dman-HEX-1:5 6b:a-dman-HEX-1:5 7b:b-dglc-HEX-1:5 8s:n-acetyl 9b:b-dgal-HEX-1:5 10b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 11s:n-acetyl 12b:a-dman-HEX-1:5 13b:b-dglc-HEX-1:5 14s:n-acetyl 15b:b-dgal-HEX-1:5 16b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 17s:n-acetyl 18b:b-dglc-HEX-1:5 19s:n-acetyl 20b:b-dgal-HEX-1:5 21b:a-lgal-HEX-1:5|6:d LIN 1:1d(2+1)2n 2:1o(4+1)3d 3:3d(2+1)4n 4:3o(4+1)5d 5:5o(3+1)6d 6:6o(2+1)7d 7:7d(2+1)8n 8:7o(4+1)9d 9:9o(3+2)10d 10:10d(5+1)11n 11:5o(6+1)12d 12:12o(2+1)13d 13:13d(2+1)14n 14:13o(4+1)15d 15:15o(3+2)16d 16:16d(5+1)17n 17:12o(6+1)18d 18:18d(2+1)19n 19:18o(4+1)20d 20:1o(6+1)21d

GlyTouCan
GlycoWorkBench

redEnd--?b?D-b-D-Glcp,p((--2NAc)--4b1D-b-D-Glcp,p(--2NAc)--4b1D-b-D-Manp,p(--3a1D-a-D-Manp,p--2b1D-b-D-Glcp,p(--2NAc)--4b1D-b-D-Galp,p--3a2D-a-D-Neup,p--5NAc)--6a1D-a-D-Manp,p(--2b1D-b-D-Glcp,p(--2NAc)--4b1D-b-D-Galp,p--3a2D-a-D-Neup,p--5NAc)--6b1D-b-D-Glcp,p(--2NAc)--4b1D-b-D-Galp,p)--6a1L-a-L-Fucp,p$MONO,perMe,Na,0,redEnd

EdwardsLab
IUPAC

alpha-D-Neup5Ac-(2->3)-beta-D-Galp-(1->4)-beta-D-GlcpNAc-(1->2)-alpha-D-Manp-(1->3)[alpha-D-Neup5Ac-(2->3)-beta-D-Galp-(1->4)-beta-D-GlcpNAc-(1->2)[beta-D-Galp-(1->4)-beta-D-GlcpNAc-(1->6)]-alpha-D-Manp-(1->6)]-beta-D-Manp-(1->4)-beta-D-GlcpNAc-(1->4)[alpha-L-Fucp-(1->6)]-beta-D-GlcpNAc-(1->

EdwardsLab
IUPAC

alpha-D-Neup5Ac-(2->3)-beta-D-Galp-(1->4)-beta-D-GlcpNAc-(1->2)-alpha-D-Manp-(1->3)[alpha-D-Neup5Ac-(2->3)-beta-D-Galp-(1->4)-beta-D-GlcpNAc-(1->2)[beta-D-Galp-(1->4)-beta-D-GlcpNAc-(1->6)]-alpha-D-Manp-(1->6)]-beta-D-Manp-(1->4)-beta-D-GlcpNAc-(1->4)[alpha-L-Fucp-(1->6)]-beta-D-GlcpNAc-(1->

GlyCosmos
WURCS

WURCS=2.0/6,14,13/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5][a2112h-1b_1-5][Aad21122h-2a_2-6_5*NCC/3=O][a1221m-1a_1-5]/1-1-2-3-1-4-5-3-1-4-5-1-4-6/a4-b1_a6-n1_b4-c1_c3-d1_c6-h1_d2-e1_e4-f1_f3-g2_h2-i1_h6-l1_i4-j1_j3-k2_l4-m1

GlyTouCan

Taxonomy

Taxonomy 9606 GlyConnectStructure:1406
Taxonomy 10029 GlyTouCan:G91905FJ
Taxonomy 9606 UniCarbKB:1795

Species

Human Evidence GlyConnectStructure:1406 TaxID 9606
No N-linked Xyl and no NeuGc, Alt
UniCarbKB:1795 TaxID 9606
EdwardsLab
Mouse Evidence Composition closure of G58848QS via G58076ER
Composition closure of G64048GU via G58076ER
Composition closure of G75977KH via G58076ER
EdwardsLab

Molecular Weight

PermethylatedMW 3392.70866415 EdwardsLab
UnderivitizedMW 2733.97311086 EdwardsLab
UnderivitizedMW 2733.9731097 GlyTouCan

Classification

GlycanSubtype N-linked core-fucosylated GlycoMotif:GGM.001024
GlycanSubtype N-linked complex GlycoMotif:GGM.001004
GlycanType N-linked GlycoMotif:GGM.001004

Monosaccharide Counts

FucCount 1 EdwardsLab
GalCount 3 EdwardsLab
GlcNAcCount 5 EdwardsLab
HexCount 6 EdwardsLab
HexNAcCount 5 EdwardsLab
ManCount 3 EdwardsLab
MonosaccharideCount 14 EdwardsLab
NeuAcCount 2 EdwardsLab
SiaCount 2 EdwardsLab
dHexCount 1 EdwardsLab
MonosaccharideCount 14 GlyTouCan

Cross Reference

GlyGen G91905FJ EdwardsLab
GNOme G91905FJ GNOme
GlyCosmos G91905FJ GlyCosmos
Carbbank(CCSB) 27285 GlyTouCan
GLYCOSCIENCES.de 12704, 24090 GlyTouCan
GlyConnectStructure 1406 GlyTouCan
GlyTouCan G91905FJ GlyTouCan
GlycomeDB 8140 GlyTouCan
KEGG G10962 GlyTouCan
PubChem CID91859305, SID252292872 GlyTouCan
GlycO GOG199 GlycomeDB
UniCarbKB 1795 UniCarbKB

Publications

Publication 2226797, 2513186, 2550193, 2813359, 3179269, 8460945, 8477709, 8687384, 10764840, 11805077 UniCarbKB:1795

Glycan Motif

ClassMotif GGM.001001, GGM.001004, GGM.001024, GGM.001027 GlycoMotif
Motif GGM.000001, GGM.000034 GlycoMotif
StrictClassMotif GGM.001001, GGM.001004, GGM.001024, GGM.001027 GlycoMotif
StrictMotif GGM.000001, GGM.000034 GlycoMotif

Subsumption

Ancestor G00553AN, G00800WJ, G04823YN, G05314WL, G07003AA, G10159DR, G11629QQ, G15212GE, G17431SG, G20510FY, G23028IO, G25569EP, G26302TI, G26985YI, G28149YN, G35740ZG, G36551EV, G36798UJ, G37626QS, G38541LS, G41929NX, G44246UD, G44754IE, G47961DI, G49917IO, G50782LR, G52754KY, G53818ZZ, G57776ZS, G58076ER, G58232MG, G59699IB, G60282LL, G66150ZZ, G74239ZQ, G74269EB, G75977KH, G79939YZ, G81604RU, G81670RK, G84981PB, G85144OK, G94571WF GNOme
BaseComposition G25569EP GNOme
Composition G58076ER GNOme
Level Saccharide GNOme
MissingScore 0 GNOme
SubsumedBy G00553AN, G00800WJ, G04823YN, G07003AA, G20510FY, G35740ZG, G47961DI, G74239ZQ GNOme
Topology G05314WL GNOme

Glycan Structure

Composition false EdwardsLab
FullyDetermined true EdwardsLab
HasMonosaccharide Fuc, Gal, GlcNAc, Hex, HexNAc, Man, NeuAc, Sia, dHex EdwardsLab
HasRepeat false EdwardsLab
ReducingEnd GlcNAc, HexNAc EdwardsLab
UndeterminedTopology false EdwardsLab