G94571WF

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Sequence

GlycoCT

RES 1b:x-dglc-HEX-1:5 2s:n-acetyl 3b:x-dglc-HEX-1:5 4s:n-acetyl 5b:x-dman-HEX-1:5 6b:x-dman-HEX-1:5 7b:x-dglc-HEX-1:5 8s:n-acetyl 9b:x-dgal-HEX-1:5 10b:x-dgro-dgal-NON-2:6|1:a|2:keto|3:d 11s:n-acetyl 12b:x-dglc-HEX-1:5 13s:n-acetyl 14b:x-dgal-HEX-1:5 15b:x-dman-HEX-1:5 16b:x-dglc-HEX-1:5 17s:n-acetyl 18b:x-dgal-HEX-1:5 19b:x-lgal-HEX-1:5|6:d LIN 1:1d(2+1)2n 2:1o(-1+1)3d 3:3d(2+1)4n 4:3o(-1+1)5d 5:5o(-1+1)6d 6:6o(-1+1)7d 7:7d(2+1)8n 8:7o(-1+1)9d 9:9o(-1+2)10d 10:10d(5+1)11n 11:6o(-1+1)12d 12:12d(2+1)13n 13:12o(-1+1)14d 14:5o(-1+1)15d 15:15o(-1+1)16d 16:16d(2+1)17n 17:16o(-1+1)18d 18:1o(-1+1)19d UND UND1:100.0:100.0 ParentIDs:1|3|5|6|7|9|10|12|14|15|16|18|19 SubtreeLinkageID1:o(-1+2)d RES 20b:x-dgro-dgal-NON-2:6|1:a|2:keto|3:d 21s:n-acetyl LIN 19:20d(5+1)21n

GlyTouCan
GlycoWorkBench

redEnd--?D-?-D-Glcp,p((--2NAc)--??1D-?-D-Glcp,p(--2NAc)--??1D-?-D-Manp,p(--??1D-?-D-Manp,p(--??1D-?-D-Glcp,p(--2NAc)--??1D-?-D-Galp,p--??2D-?-D-Neup,p--5NAc)--??1D-?-D-Glcp,p(--2NAc)--??1D-?-D-Galp,p)--??1D-?-D-Manp,p--??1D-?-D-Glcp,p(--2NAc)--??1D-?-D-Galp,p)--??1L-?-L-Fucp,p}--?D-?-D-Neup,p--5NAc$MONO,perMe,Na,0,redEnd

EdwardsLab
WURCS

WURCS=2.0/5,14,13/[a2122h-1x_1-5_2*NCC/3=O][a1122h-1x_1-5][a2112h-1x_1-5][Aad21122h-2x_2-6_5*NCC/3=O][a1221m-1x_1-5]/1-1-2-2-1-3-4-1-3-2-1-3-5-4/a?-b1_a?-m1_b?-c1_c?-d1_c?-j1_d?-e1_d?-h1_e?-f1_f?-g2_h?-i1_j?-k1_k?-l1_n2-a?|b?|c?|d?|e?|f?|g?|h?|i?|j?|k?|l?|m?}

GlyTouCan

Species

Human Evidence Subsumption of G00800WJ
Subsumption of G10228OD
Subsumption of G16150CJ
Subsumption of G16529MG
Subsumption of G21454AE
Subsumption of G22208HN
Subsumption of G37306TB
Subsumption of G38022PE
Subsumption of G42686NQ
Subsumption of G47961DI
Subsumption of G62765SF
Subsumption of G80537QW
Subsumption of G91905FJ
Subsumption of G96916QO
EdwardsLab
Mouse Evidence Subsumption of G64048GU EdwardsLab

Molecular Weight

PermethylatedMW 3392.70866415 EdwardsLab
UnderivitizedMW 2733.97311086 EdwardsLab
UnderivitizedMW 2733.9731097 GlyTouCan

Classification

GlycanSubtype N-linked complex GlycoMotif:GGM.001004
GlycanSubtype N-linked core-fucosylated GlycoMotif:GGM.001024
GlycanType N-linked GlycoMotif:GGM.001004

Monosaccharide Counts

FucCount 1 EdwardsLab
GalCount 3 EdwardsLab
GlcNAcCount 5 EdwardsLab
HexCount 6 EdwardsLab
HexNAcCount 5 EdwardsLab
ManCount 3 EdwardsLab
MonosaccharideCount 14 EdwardsLab
NeuAcCount 2 EdwardsLab
SiaCount 2 EdwardsLab
dHexCount 1 EdwardsLab
MonosaccharideCount 14 GlyTouCan

Cross Reference

GlyGen G94571WF EdwardsLab
GNOme G94571WF GNOme
GlyCosmos G94571WF GlyCosmos
GlyTouCan G94571WF GlyTouCan

Glycan Motif

ClassMotif GGM.001001, GGM.001004, GGM.001024, GGM.001027 GlycoMotif
Motif GGM.000001, GGM.000005, GGM.000034 GlycoMotif
StrictClassMotif GGM.001027 GlycoMotif

Subsumption

Ancestor G11629QQ, G23028IO, G25569EP, G49917IO, G57776ZS, G58076ER, G59699IB, G85144OK GNOme
BaseComposition G25569EP GNOme
Composition G58076ER GNOme
Descendant G00800WJ, G01354KL, G03075ZE, G05314WL, G07003AA, G10228OD, G15730FJ, G16150CJ, G16529MG, G18581LO, G18724OW, G20919FV, G21454AE, G22208HN, G25460BQ, G28149YN, G29419HY, G31662BR, G32510IZ, G37306TB, G38022PE, G39810GC, G42686NQ, G45720CA, G47280HM, G47961DI, G58571IP, G59345UT, G62765SF, G64048GU, G64936OS, G80537QW, G84981PB, G87489PB, G89378UY, G90669BC, G91905FJ, G94737YG, G96916QO GNOme
FullyDetermined G01354KL, G03075ZE, G10228OD, G16150CJ, G16529MG, G18581LO, G31662BR, G38022PE, G42686NQ, G45720CA, G47280HM, G62765SF, G80537QW, G91905FJ GNOme
Level Topology GNOme
MissingScore 1273 GNOme
Saccharides G00800WJ, G28149YN, G89378UY, G90669BC GNOme
SubsumedBy G49917IO, G58076ER GNOme
Subsumes G05314WL, G28149YN, G29419HY, G89378UY GNOme
Topology G94571WF GNOme

Glycan Structure

Composition false EdwardsLab
FullyDetermined false EdwardsLab
HasMonosaccharide Fuc, Gal, GlcNAc, Hex, HexNAc, Man, NeuAc, Sia, dHex EdwardsLab
HasRepeat false EdwardsLab
ReducingEnd GlcNAc, HexNAc EdwardsLab
UndeterminedTopology true EdwardsLab