G96916QO

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Sequence

GlycoCT

RES 1b:x-dglc-HEX-1:5 2s:n-acetyl 3b:b-dglc-HEX-1:5 4s:n-acetyl 5b:b-dman-HEX-1:5 6b:a-dman-HEX-1:5 7b:b-dglc-HEX-1:5 8s:n-acetyl 9b:b-dgal-HEX-1:5 10b:a-dman-HEX-1:5 11b:b-dglc-HEX-1:5 12s:n-acetyl 13b:b-dgal-HEX-1:5 14b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 15s:n-acetyl 16b:b-dglc-HEX-1:5 17s:n-acetyl 18b:b-dgal-HEX-1:5 19b:a-dgro-dgal-NON-2:6|1:a|2:keto|3:d 20s:n-acetyl 21b:a-lgal-HEX-1:5|6:d LIN 1:1d(2+1)2n 2:1o(4+1)3d 3:3d(2+1)4n 4:3o(4+1)5d 5:5o(3+1)6d 6:6o(2+1)7d 7:7d(2+1)8n 8:7o(4+1)9d 9:5o(6+1)10d 10:10o(2+1)11d 11:11d(2+1)12n 12:11o(4+1)13d 13:13o(3+2)14d 14:14d(5+1)15n 15:10o(6+1)16d 16:16d(2+1)17n 17:16o(4+1)18d 18:18o(3+2)19d 19:19d(5+1)20n 20:1o(6+1)21d

GlyTouCan
GlycoWorkBench

redEnd--?D-?-D-Glcp,p((--2NAc)--4b1D-b-D-Glcp,p(--2NAc)--4b1D-b-D-Manp,p(--3a1D-a-D-Manp,p--2b1D-b-D-Glcp,p(--2NAc)--4b1D-b-D-Galp,p)--6a1D-a-D-Manp,p(--2b1D-b-D-Glcp,p(--2NAc)--4b1D-b-D-Galp,p--3a2D-a-D-Neup,p--5NAc)--6b1D-b-D-Glcp,p(--2NAc)--4b1D-b-D-Galp,p--3a2D-a-D-Neup,p--5NAc)--6a1L-a-L-Fucp,p$MONO,perMe,Na,0,redEnd

EdwardsLab
IUPAC

beta-D-Galp-(1->4)-beta-D-GlcpNAc-(1->2)-alpha-D-Manp-(1->3)[alpha-D-Neup5Ac-(2->3)-beta-D-Galp-(1->4)-beta-D-GlcpNAc-(1->2)[alpha-D-Neup5Ac-(2->3)-beta-D-Galp-(1->4)-beta-D-GlcpNAc-(1->6)]-alpha-D-Manp-(1->6)]-beta-D-Manp-(1->4)-beta-D-GlcpNAc-(1->4)[alpha-L-Fucp-(1->6)]-?-D-GlcpNAc-(1->

EdwardsLab
IUPAC

beta-D-Galp-(1->4)-beta-D-GlcpNAc-(1->2)-alpha-D-Manp-(1->3)[alpha-D-Neup5Ac-(2->3)-beta-D-Galp-(1->4)-beta-D-GlcpNAc-(1->2)[alpha-D-Neup5Ac-(2->3)-beta-D-Galp-(1->4)-beta-D-GlcpNAc-(1->6)]-alpha-D-Manp-(1->6)]-beta-D-Manp-(1->4)-beta-D-GlcpNAc-(1->4)[alpha-L-Fucp-(1->6)]-?-D-GlcpNAc-(1->

GlyCosmos
WURCS

WURCS=2.0/7,14,13/[a2122h-1x_1-5_2*NCC/3=O][a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5][a2112h-1b_1-5][Aad21122h-2a_2-6_5*NCC/3=O][a1221m-1a_1-5]/1-2-3-4-2-5-4-2-5-6-2-5-6-7/a4-b1_a6-n1_b4-c1_c3-d1_c6-g1_d2-e1_e4-f1_g2-h1_g6-k1_h4-i1_i3-j2_k4-l1_l3-m2

GlyTouCan

Taxonomy

Taxonomy 9606, 10029, 10036 GlyTouCan:G96916QO

Species

Human Evidence GlyTouCan:G96916QO TaxID 9606
No N-linked Xyl and no NeuGc, Alt
EdwardsLab
Mouse Evidence Composition closure of G58848QS via G58076ER
Composition closure of G64048GU via G58076ER
Composition closure of G75977KH via G58076ER
EdwardsLab

Molecular Weight

PermethylatedMW 3392.70866415 EdwardsLab
UnderivitizedMW 2733.97311086 EdwardsLab
UnderivitizedMW 2733.9731097 GlyTouCan

Classification

GlycanSubtype N-linked complex GlycoMotif:GGM.001004
GlycanSubtype N-linked core-fucosylated GlycoMotif:GGM.001024
GlycanType N-linked GlycoMotif:GGM.001004

Monosaccharide Counts

FucCount 1 EdwardsLab
GalCount 3 EdwardsLab
GlcNAcCount 5 EdwardsLab
HexCount 6 EdwardsLab
HexNAcCount 5 EdwardsLab
ManCount 3 EdwardsLab
MonosaccharideCount 14 EdwardsLab
NeuAcCount 2 EdwardsLab
SiaCount 2 EdwardsLab
dHexCount 1 EdwardsLab
MonosaccharideCount 14 GlyTouCan

Cross Reference

GlyGen G96916QO EdwardsLab
GNOme G96916QO GNOme
GlyCosmos G96916QO GlyCosmos
CFG carbNlink_20688_D000, carbNlink_43585_D000 GlyTouCan
GlyTouCan G96916QO GlyTouCan
GlycomeDB 18272 GlyTouCan
KEGG G01685 GlyTouCan
PubChem CID71297867, SID252276221 GlyTouCan

Glycan Motif

ClassMotif GGM.001001, GGM.001004, GGM.001024, GGM.001027 GlycoMotif
Motif GGM.000001, GGM.000034 GlycoMotif
StrictClassMotif GGM.001001, GGM.001004, GGM.001024, GGM.001027 GlycoMotif
StrictMotif GGM.000001, GGM.000034 GlycoMotif

Subsumption

Ancestor G11629QQ, G23028IO, G25569EP, G26302TI, G26985YI, G28149YN, G29419HY, G37626QS, G38541LS, G44246UD, G44754IE, G49917IO, G57776ZS, G58076ER, G59699IB, G60282LL, G74269EB, G79137JG, G81670RK, G81874XM, G83654NV, G85144OK, G94571WF GNOme
BaseComposition G25569EP GNOme
Composition G58076ER GNOme
Descendant G16529MG GNOme
FullyDetermined G16529MG GNOme
Level Saccharide GNOme
MissingScore 49 GNOme
SubsumedBy G26985YI, G28149YN, G29419HY, G44754IE, G81874XM GNOme
Subsumes G16529MG GNOme
Topology G29419HY GNOme

Glycan Structure

Composition false EdwardsLab
FullyDetermined true EdwardsLab
HasMonosaccharide Fuc, Gal, GlcNAc, Hex, HexNAc, Man, NeuAc, Sia, dHex EdwardsLab
HasRepeat false EdwardsLab
ReducingEnd GlcNAc, HexNAc EdwardsLab
UndeterminedTopology false EdwardsLab