G58848QS

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Sequence

GlycoCT

RES 1b:b-dglc-HEX-1:5 2s:n-acetyl 3b:b-dglc-HEX-1:5 4s:n-acetyl 5b:b-dman-HEX-1:5 6b:a-dman-HEX-1:5 7b:b-dglc-HEX-1:5 8s:n-acetyl 9b:b-dgal-HEX-1:5 10b:b-dglc-HEX-1:5 11s:n-acetyl 12b:b-dgal-HEX-1:5 13b:a-dman-HEX-1:5 14b:b-dglc-HEX-1:5 15s:n-acetyl 16b:b-dgal-HEX-1:5 17b:a-lgal-HEX-1:5|6:d LIN 1:1d(2+1)2n 2:1o(4+1)3d 3:3d(2+1)4n 4:3o(4+1)5d 5:5o(3+1)6d 6:6o(2+1)7d 7:7d(2+1)8n 8:7o(4+1)9d 9:6o(4+1)10d 10:10d(2+1)11n 11:10o(4+1)12d 12:5o(6+1)13d 13:13o(2+1)14d 14:14d(2+1)15n 15:14o(4+1)16d 16:1o(6+1)17d UND UND1:100.0:100.0 ParentIDs:1|3|5|6|7|9|10|12|13|14|16|17 SubtreeLinkageID1:o(-1+2)d RES 18b:x-dgro-dgal-NON-2:6|1:a|2:keto|3:d 19s:n-acetyl LIN 17:18d(5+1)19n UND2:100.0:100.0 ParentIDs:1|3|5|6|7|9|10|12|13|14|16|17 SubtreeLinkageID1:o(-1+2)d RES 20b:x-dgro-dgal-NON-2:6|1:a|2:keto|3:d 21s:n-acetyl LIN 18:20d(5+1)21n

GlyTouCan
GlycoWorkBench

redEnd--?b?D-b-D-Glcp,p((--2NAc)--4b1D-b-D-Glcp,p(--2NAc)--4b1D-b-D-Manp,p(--3a1D-a-D-Manp,p(--2b1D-b-D-Glcp,p(--2NAc)--4b1D-b-D-Galp,p)--4b1D-b-D-Glcp,p(--2NAc)--4b1D-b-D-Galp,p)--6a1D-a-D-Manp,p--2b1D-b-D-Glcp,p(--2NAc)--4b1D-b-D-Galp,p)--6a1L-a-L-Fucp,p}(--?D-?-D-Neup,p--5NAc)--?D-?-D-Neup,p--5NAc$MONO,perMe,Na,0,redEnd

EdwardsLab
WURCS

WURCS=2.0/6,14,13/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5][a2112h-1b_1-5][a1221m-1a_1-5][Aad21122h-2x_2-6_5*NCC/3=O]/1-1-2-3-1-4-1-4-3-1-4-5-6-6/a4-b1_a6-l1_b4-c1_c3-d1_c6-i1_d2-e1_d4-g1_e4-f1_g4-h1_i2-j1_j4-k1_m2-a?|b?|c?|d?|e?|f?|g?|h?|i?|j?|k?|l?}_n2-a?|b?|c?|d?|e?|f?|g?|h?|i?|j?|k?|l?}

GlyTouCan

Taxonomy

Taxonomy 10090 UniCarbKB:7726

Species

Human Evidence Subsumption of G01543ZX
Subsumption of G10228OD
Subsumption of G16150CJ
Subsumption of G38022PE
Subsumption of G42686NQ
Subsumption of G45661NA
Subsumption of G62765SF
EdwardsLab
Mouse Evidence No N-linked Xyl and no Alt
UniCarbKB:7726 TaxID 10090
EdwardsLab

Molecular Weight

PermethylatedMW 3392.70866415 EdwardsLab
UnderivitizedMW 2733.97311086 EdwardsLab
UnderivitizedMW 2733.9731097 GlyTouCan

Classification

GlycanSubtype N-linked complex GlycoMotif:GGM.001004
GlycanSubtype N-linked core-fucosylated GlycoMotif:GGM.001024
GlycanType N-linked GlycoMotif:GGM.001004

Monosaccharide Counts

FucCount 1 EdwardsLab
GalCount 3 EdwardsLab
GlcNAcCount 5 EdwardsLab
HexCount 6 EdwardsLab
HexNAcCount 5 EdwardsLab
ManCount 3 EdwardsLab
MonosaccharideCount 14 EdwardsLab
NeuAcCount 2 EdwardsLab
SiaCount 2 EdwardsLab
dHexCount 1 EdwardsLab
MonosaccharideCount 14 GlyTouCan

Cross Reference

GlyGen G58848QS EdwardsLab
GNOme G58848QS GNOme
GlyCosmos G58848QS GlyCosmos
GlyTouCan G58848QS GlyTouCan
UniCarbKB 7726 UniCarbKB

Publications

Publication 21573946 UniCarbKB:7726

Glycan Motif

ClassMotif GGM.001001, GGM.001004, GGM.001024, GGM.001027 GlycoMotif
Motif GGM.000001, GGM.000034 GlycoMotif
StrictClassMotif GGM.001001, GGM.001004, GGM.001024, GGM.001027 GlycoMotif
StrictMotif GGM.000001 GlycoMotif

Subsumption

Ancestor G01450UB, G11629QQ, G23028IO, G25569EP, G26302TI, G36798UJ, G38541LS, G44246UD, G49917IO, G52754KY, G57776ZS, G58076ER, G59699IB, G60282LL, G79939YZ, G85144OK GNOme
BaseComposition G25569EP GNOme
Composition G58076ER GNOme
Descendant G01354KL, G01543ZX, G03075ZE, G10228OD, G16150CJ, G18581LO, G31662BR, G37812PU, G38022PE, G42686NQ, G45661NA, G45720CA, G47280HM, G48789OQ, G62765SF GNOme
FullyDetermined G01354KL, G03075ZE, G10228OD, G16150CJ, G18581LO, G31662BR, G38022PE, G42686NQ, G45720CA, G47280HM, G62765SF GNOme
Level Saccharide GNOme
MissingScore 613 GNOme
SubsumedBy G01450UB GNOme
Subsumes G48789OQ GNOme
Topology G44246UD GNOme

Glycan Structure

Composition false EdwardsLab
FullyDetermined false EdwardsLab
HasMonosaccharide Fuc, Gal, GlcNAc, Hex, HexNAc, Man, NeuAc, Sia, dHex EdwardsLab
HasRepeat false EdwardsLab
ReducingEnd GlcNAc, HexNAc EdwardsLab
UndeterminedTopology true EdwardsLab